Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.31■□□□□ 0.68
RTCAO00442 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTCAO00442 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTCAO00442 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTCAO00442 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.3■□□□□ 0.68
RTCAO00442 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTCAO00442 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTCAO00442 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTCAO00442 KRT18P68-201ENST00000392293 1000 ntBASIC19.3■□□□□ 0.68
RTCAO00442 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RTCAO00442 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.3■□□□□ 0.68
RTCAO00442 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.3■□□□□ 0.68
RTCAO00442 AF201337.1-201ENST00000520239 748 ntBASIC19.3■□□□□ 0.68
RTCAO00442 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.3■□□□□ 0.68
RTCAO00442 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
RTCAO00442 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
RTCAO00442 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.3■□□□□ 0.68
RTCAO00442 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
RTCAO00442 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTCAO00442 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RTCAO00442 KRT17P1-201ENST00000399211 1546 ntBASIC19.3■□□□□ 0.68
RTCAO00442 DPP3P2-201ENST00000416030 1696 ntBASIC19.3■□□□□ 0.68
RTCAO00442 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.3■□□□□ 0.68
RTCAO00442 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RTCAO00442 AC112907.3-201ENST00000577781 2400 ntBASIC19.3■□□□□ 0.68
RTCAO00442 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RTCAO00442 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.29■□□□□ 0.68
RTCAO00442 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RTCAO00442 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTCAO00442 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.29■□□□□ 0.68
RTCAO00442 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.29■□□□□ 0.68
RTCAO00442 AL512625.2-201ENST00000417533 625 ntBASIC19.29■□□□□ 0.68
RTCAO00442 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RTCAO00442 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTCAO00442 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.29■□□□□ 0.68
RTCAO00442 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.29■□□□□ 0.68
RTCAO00442 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTCAO00442 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTCAO00442 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RTCAO00442 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTCAO00442 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTCAO00442 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RTCAO00442 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.28■□□□□ 0.68
RTCAO00442 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTCAO00442 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTCAO00442 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.28■□□□□ 0.68
RTCAO00442 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RTCAO00442 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTCAO00442 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
RTCAO00442 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTCAO00442 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTCAO00442 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RTCAO00442 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RTCAO00442 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.28■□□□□ 0.68
RTCAO00442 AC105020.6-201ENST00000621523 1217 ntBASIC19.28■□□□□ 0.68
RTCAO00442 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
RTCAO00442 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.28■□□□□ 0.68
RTCAO00442 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTCAO00442 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
RTCAO00442 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTCAO00442 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.28■□□□□ 0.68
RTCAO00442 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RTCAO00442 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.27■□□□□ 0.68
RTCAO00442 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RTCAO00442 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTCAO00442 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTCAO00442 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.27■□□□□ 0.68
RTCAO00442 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RTCAO00442 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.27■□□□□ 0.68
RTCAO00442 AL162377.1-201ENST00000618844 1793 ntBASIC19.27■□□□□ 0.68
RTCAO00442 MKRN4P-201ENST00000444706 1521 ntBASIC19.27■□□□□ 0.68
RTCAO00442 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.27■□□□□ 0.68
RTCAO00442 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTCAO00442 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTCAO00442 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RTCAO00442 AC083906.2-201ENST00000511578 360 ntBASIC19.27■□□□□ 0.68
RTCAO00442 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.27■□□□□ 0.68
RTCAO00442 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTCAO00442 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTCAO00442 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTCAO00442 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RTCAO00442 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RTCAO00442 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RTCAO00442 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RTCAO00442 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTCAO00442 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTCAO00442 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTCAO00442 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RTCAO00442 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.26■□□□□ 0.67
RTCAO00442 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTCAO00442 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTCAO00442 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RTCAO00442 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.26■□□□□ 0.67
RTCAO00442 AC090192.1-201ENST00000517740 490 ntBASIC19.26■□□□□ 0.67
RTCAO00442 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.26■□□□□ 0.67
RTCAO00442 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.26■□□□□ 0.67
RTCAO00442 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.26■□□□□ 0.67
RTCAO00442 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.26■□□□□ 0.67
RTCAO00442 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.26■□□□□ 0.67
RTCAO00442 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms