Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPBD1B2RD01 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPBD1B2RD01 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.34■□□□□ 0.53
CENPBD1B2RD01 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.34■□□□□ 0.53
CENPBD1B2RD01 RBM17P2-201ENST00000616397 1405 ntBASIC18.34■□□□□ 0.53
CENPBD1B2RD01 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CENPBD1B2RD01 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CENPBD1B2RD01 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CENPBD1B2RD01 AP005212.1-201ENST00000581547 1997 ntBASIC18.34■□□□□ 0.53
CENPBD1B2RD01 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CENPBD1B2RD01 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPBD1B2RD01 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.34■□□□□ 0.53
CENPBD1B2RD01 AC026271.2-201ENST00000428091 497 ntBASIC18.34■□□□□ 0.53
CENPBD1B2RD01 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.34■□□□□ 0.53
CENPBD1B2RD01 RARRES2P6-201ENST00000567333 442 ntBASIC18.34■□□□□ 0.53
CENPBD1B2RD01 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.34■□□□□ 0.53
CENPBD1B2RD01 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.34■□□□□ 0.53
CENPBD1B2RD01 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPBD1B2RD01 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPBD1B2RD01 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CENPBD1B2RD01 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CENPBD1B2RD01 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CENPBD1B2RD01 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.33■□□□□ 0.53
CENPBD1B2RD01 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CENPBD1B2RD01 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
CENPBD1B2RD01 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CENPBD1B2RD01 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.33■□□□□ 0.53
CENPBD1B2RD01 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CENPBD1B2RD01 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CENPBD1B2RD01 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CENPBD1B2RD01 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CENPBD1B2RD01 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.33■□□□□ 0.52
CENPBD1B2RD01 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CENPBD1B2RD01 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CENPBD1B2RD01 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CENPBD1B2RD01 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.33■□□□□ 0.52
CENPBD1B2RD01 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.33■□□□□ 0.52
CENPBD1B2RD01 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CENPBD1B2RD01 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.33■□□□□ 0.52
CENPBD1B2RD01 MYCNOS-205ENST00000641950 531 ntBASIC18.33■□□□□ 0.52
CENPBD1B2RD01 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.33■□□□□ 0.52
CENPBD1B2RD01 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CENPBD1B2RD01 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CENPBD1B2RD01 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CENPBD1B2RD01 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CENPBD1B2RD01 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CENPBD1B2RD01 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CENPBD1B2RD01 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CENPBD1B2RD01 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 SMG8-203ENST00000578922 2178 ntBASIC18.32■□□□□ 0.52
CENPBD1B2RD01 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 AC116050.2-201ENST00000612102 1779 ntBASIC18.32■□□□□ 0.52
CENPBD1B2RD01 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.32■□□□□ 0.52
CENPBD1B2RD01 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.31■□□□□ 0.52
CENPBD1B2RD01 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms