Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01548A6NM66 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01548A6NM66 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.97■□□□□ 0.15
LINC01548A6NM66 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01548A6NM66 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01548A6NM66 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01548A6NM66 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.96■□□□□ 0.15
LINC01548A6NM66 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01548A6NM66 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01548A6NM66 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
LINC01548A6NM66 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01548A6NM66 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01548A6NM66 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01548A6NM66 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01548A6NM66 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01548A6NM66 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01548A6NM66 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01548A6NM66 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01548A6NM66 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LINC01548A6NM66 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.96■□□□□ 0.15
LINC01548A6NM66 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.96■□□□□ 0.15
LINC01548A6NM66 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01548A6NM66 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01548A6NM66 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LINC01548A6NM66 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15.96■□□□□ 0.14
LINC01548A6NM66 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LINC01548A6NM66 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
LINC01548A6NM66 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LINC01548A6NM66 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
LINC01548A6NM66 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01548A6NM66 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.95■□□□□ 0.14
LINC01548A6NM66 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.95■□□□□ 0.14
LINC01548A6NM66 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LINC01548A6NM66 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LINC01548A6NM66 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01548A6NM66 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LINC01548A6NM66 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01548A6NM66 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.95■□□□□ 0.14
LINC01548A6NM66 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.95■□□□□ 0.14
LINC01548A6NM66 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01548A6NM66 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.95■□□□□ 0.14
LINC01548A6NM66 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.95■□□□□ 0.14
LINC01548A6NM66 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC15.95■□□□□ 0.14
LINC01548A6NM66 RNF165-205ENST00000588679 2904 ntBASIC15.95■□□□□ 0.14
LINC01548A6NM66 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01548A6NM66 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01548A6NM66 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LINC01548A6NM66 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
LINC01548A6NM66 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01548A6NM66 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC15.95■□□□□ 0.14
LINC01548A6NM66 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01548A6NM66 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.95■□□□□ 0.14
LINC01548A6NM66 AC092720.2-201ENST00000602388 1665 ntBASIC15.95■□□□□ 0.14
LINC01548A6NM66 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.95■□□□□ 0.14
LINC01548A6NM66 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LINC01548A6NM66 FEM1AP1-201ENST00000431297 1995 ntBASIC15.95■□□□□ 0.14
LINC01548A6NM66 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC15.95■□□□□ 0.14
LINC01548A6NM66 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01548A6NM66 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01548A6NM66 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.94■□□□□ 0.14
LINC01548A6NM66 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01548A6NM66 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
LINC01548A6NM66 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01548A6NM66 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01548A6NM66 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01548A6NM66 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01548A6NM66 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01548A6NM66 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01548A6NM66 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LINC01548A6NM66 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01548A6NM66 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01548A6NM66 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01548A6NM66 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01548A6NM66 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.94■□□□□ 0.14
LINC01548A6NM66 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01548A6NM66 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.94■□□□□ 0.14
LINC01548A6NM66 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
LINC01548A6NM66 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LINC01548A6NM66 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.94■□□□□ 0.14
LINC01548A6NM66 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01548A6NM66 H19-201ENST00000411754 1788 ntTSL 5 BASIC15.94■□□□□ 0.14
LINC01548A6NM66 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.94■□□□□ 0.14
LINC01548A6NM66 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01548A6NM66 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LINC01548A6NM66 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01548A6NM66 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LINC01548A6NM66 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01548A6NM66 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01548A6NM66 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.93■□□□□ 0.14
LINC01548A6NM66 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01548A6NM66 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01548A6NM66 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.93■□□□□ 0.14
LINC01548A6NM66 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
LINC01548A6NM66 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01548A6NM66 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01548A6NM66 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LINC01548A6NM66 TSPY20P-201ENST00000450910 630 ntBASIC15.93■□□□□ 0.14
LINC01548A6NM66 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC15.93■□□□□ 0.14
LINC01548A6NM66 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LINC01548A6NM66 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms