Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC23.79■■□□□ 1.4
TMEM88BA6NKF7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM88BA6NKF7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM88BA6NKF7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC23.79■■□□□ 1.4
TMEM88BA6NKF7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.79■■□□□ 1.4
TMEM88BA6NKF7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM88BA6NKF7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM88BA6NKF7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM88BA6NKF7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM88BA6NKF7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TMEM88BA6NKF7 AC023632.3-201ENST00000521633 145 ntBASIC23.78■■□□□ 1.4
TMEM88BA6NKF7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM88BA6NKF7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM88BA6NKF7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
TMEM88BA6NKF7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM88BA6NKF7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM88BA6NKF7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.77■■□□□ 1.4
TMEM88BA6NKF7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TMEM88BA6NKF7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
TMEM88BA6NKF7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TMEM88BA6NKF7 INGX-201ENST00000359239 846 ntBASIC23.77■■□□□ 1.4
TMEM88BA6NKF7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TMEM88BA6NKF7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC23.77■■□□□ 1.4
TMEM88BA6NKF7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.77■■□□□ 1.4
TMEM88BA6NKF7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.77■■□□□ 1.4
TMEM88BA6NKF7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TMEM88BA6NKF7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TMEM88BA6NKF7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC23.77■■□□□ 1.4
TMEM88BA6NKF7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.77■■□□□ 1.4
TMEM88BA6NKF7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
TMEM88BA6NKF7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TMEM88BA6NKF7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.77■■□□□ 1.4
TMEM88BA6NKF7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM88BA6NKF7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.76■■□□□ 1.39
TMEM88BA6NKF7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.76■■□□□ 1.39
TMEM88BA6NKF7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
TMEM88BA6NKF7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM88BA6NKF7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM88BA6NKF7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM88BA6NKF7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC23.76■■□□□ 1.39
TMEM88BA6NKF7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
TMEM88BA6NKF7 MESTP1-201ENST00000404287 994 ntBASIC23.76■■□□□ 1.39
TMEM88BA6NKF7 YBX1P2-201ENST00000489612 999 ntBASIC23.76■■□□□ 1.39
TMEM88BA6NKF7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC23.76■■□□□ 1.39
TMEM88BA6NKF7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC23.76■■□□□ 1.39
TMEM88BA6NKF7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.76■■□□□ 1.39
TMEM88BA6NKF7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM88BA6NKF7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM88BA6NKF7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 AC026471.6-201ENST00000622954 1905 ntBASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 HMGA1P5-201ENST00000412453 271 ntBASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM88BA6NKF7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
TMEM88BA6NKF7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TMEM88BA6NKF7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TMEM88BA6NKF7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
TMEM88BA6NKF7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TMEM88BA6NKF7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC23.74■■□□□ 1.39
TMEM88BA6NKF7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.74■■□□□ 1.39
TMEM88BA6NKF7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC23.74■■□□□ 1.39
TMEM88BA6NKF7 DGCR10-201ENST00000609839 495 ntBASIC23.74■■□□□ 1.39
TMEM88BA6NKF7 AL138966.2-201ENST00000621997 464 ntBASIC23.74■■□□□ 1.39
TMEM88BA6NKF7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.74■■□□□ 1.39
TMEM88BA6NKF7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TMEM88BA6NKF7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TMEM88BA6NKF7 AC010542.4-201ENST00000563151 1910 ntBASIC23.73■■□□□ 1.39
TMEM88BA6NKF7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TMEM88BA6NKF7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC23.73■■□□□ 1.39
TMEM88BA6NKF7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC23.73■■□□□ 1.39
TMEM88BA6NKF7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC23.73■■□□□ 1.39
TMEM88BA6NKF7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC23.73■■□□□ 1.39
TMEM88BA6NKF7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TMEM88BA6NKF7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC23.73■■□□□ 1.39
TMEM88BA6NKF7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC23.73■■□□□ 1.39
TMEM88BA6NKF7 GPALPP1-207ENST00000611650 899 ntBASIC23.73■■□□□ 1.39
TMEM88BA6NKF7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC23.73■■□□□ 1.39
TMEM88BA6NKF7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TMEM88BA6NKF7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.73■■□□□ 1.39
TMEM88BA6NKF7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.73■■□□□ 1.39
TMEM88BA6NKF7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.73■■□□□ 1.39
TMEM88BA6NKF7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TMEM88BA6NKF7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms