Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHISA3A0PJX4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHISA3A0PJX4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.63■□□□□ 0.41
SHISA3A0PJX4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHISA3A0PJX4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SHISA3A0PJX4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.63■□□□□ 0.41
SHISA3A0PJX4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHISA3A0PJX4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SHISA3A0PJX4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHISA3A0PJX4 AC233992.3-201ENST00000607491 485 ntBASIC17.63■□□□□ 0.41
SHISA3A0PJX4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SHISA3A0PJX4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHISA3A0PJX4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SHISA3A0PJX4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SHISA3A0PJX4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.63■□□□□ 0.41
SHISA3A0PJX4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHISA3A0PJX4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHISA3A0PJX4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.63■□□□□ 0.41
SHISA3A0PJX4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SHISA3A0PJX4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 AC126544.1-201ENST00000580842 1059 ntBASIC17.62■□□□□ 0.41
SHISA3A0PJX4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHISA3A0PJX4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.61■□□□□ 0.41
SHISA3A0PJX4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SHISA3A0PJX4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.6■□□□□ 0.41
SHISA3A0PJX4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.6■□□□□ 0.41
SHISA3A0PJX4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHISA3A0PJX4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHISA3A0PJX4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SHISA3A0PJX4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHISA3A0PJX4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHISA3A0PJX4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHISA3A0PJX4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHISA3A0PJX4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SHISA3A0PJX4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SHISA3A0PJX4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SHISA3A0PJX4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms