Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV21A0A0B4J279 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.02■□□□□ -0
TRAV21A0A0B4J279 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.02■□□□□ -0
TRAV21A0A0B4J279 IRS3P-201ENST00000223076 1006 ntBASIC15.02■□□□□ -0
TRAV21A0A0B4J279 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV21A0A0B4J279 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRAV21A0A0B4J279 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV21A0A0B4J279 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV21A0A0B4J279 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV21A0A0B4J279 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV21A0A0B4J279 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV21A0A0B4J279 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV21A0A0B4J279 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV21A0A0B4J279 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV21A0A0B4J279 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV21A0A0B4J279 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV21A0A0B4J279 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TRAV21A0A0B4J279 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAV21A0A0B4J279 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV21A0A0B4J279 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV21A0A0B4J279 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV21A0A0B4J279 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV21A0A0B4J279 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 LINC02228-203ENST00000641970 1355 ntBASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 AC027612.3-201ENST00000413684 1047 ntBASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 AL139246.5-201ENST00000606645 996 ntBASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV21A0A0B4J279 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 KRT18P20-201ENST00000548986 1279 ntBASIC15□□□□□ -0.01
TRAV21A0A0B4J279 CCDC92B-201ENST00000575506 885 ntBASIC15□□□□□ -0.01
TRAV21A0A0B4J279 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV21A0A0B4J279 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 AP001160.3-201ENST00000601484 763 ntBASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 AC104187.1-201ENST00000607510 612 ntBASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 FAM21FP-204ENST00000608637 956 ntBASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 SMG8-203ENST00000578922 2178 ntBASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV21A0A0B4J279 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV21A0A0B4J279 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms