Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV1-2A0A0B4J238 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV1-2A0A0B4J238 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
TRAV1-2A0A0B4J238 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV1-2A0A0B4J238 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.58■□□□□ 0.4
TRAV1-2A0A0B4J238 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV1-2A0A0B4J238 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV1-2A0A0B4J238 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV1-2A0A0B4J238 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV1-2A0A0B4J238 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV1-2A0A0B4J238 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV1-2A0A0B4J238 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV1-2A0A0B4J238 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAV1-2A0A0B4J238 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRAV1-2A0A0B4J238 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV1-2A0A0B4J238 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV1-2A0A0B4J238 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV1-2A0A0B4J238 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV1-2A0A0B4J238 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV1-2A0A0B4J238 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
TRAV1-2A0A0B4J238 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV1-2A0A0B4J238 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV1-2A0A0B4J238 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV1-2A0A0B4J238 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV1-2A0A0B4J238 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV1-2A0A0B4J238 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV1-2A0A0B4J238 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV1-2A0A0B4J238 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV1-2A0A0B4J238 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.54■□□□□ 0.4
TRAV1-2A0A0B4J238 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV1-2A0A0B4J238 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV1-2A0A0B4J238 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV1-2A0A0B4J238 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TRAV1-2A0A0B4J238 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV1-2A0A0B4J238 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRAV1-2A0A0B4J238 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV1-2A0A0B4J238 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV1-2A0A0B4J238 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV1-2A0A0B4J238 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV1-2A0A0B4J238 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV1-2A0A0B4J238 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV1-2A0A0B4J238 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV1-2A0A0B4J238 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV1-2A0A0B4J238 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRAV1-2A0A0B4J238 TSPY26P-201ENST00000476365 1326 ntBASIC17.53■□□□□ 0.4
TRAV1-2A0A0B4J238 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV1-2A0A0B4J238 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV1-2A0A0B4J238 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV1-2A0A0B4J238 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms