Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 AL020996.1-203ENST00000536896 2307 ntBASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC14.27□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRAV8-3A0A0A6YYJ7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV8-3A0A0A6YYJ7 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms