Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AL591742.1-201ENST00000604433 565 ntBASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 MIR6821-201ENST00000617625 74 ntBASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AC010536.3-201ENST00000620306 533 ntBASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-8A0A0A6YYG3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 DPP3P2-201ENST00000416030 1696 ntBASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AL162412.1-201ENST00000567129 965 ntBASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AC013268.1-206ENST00000638368 961 ntBASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AC112229.1-201ENST00000639295 961 ntBASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-8A0A0A6YYG3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRBV6-8A0A0A6YYG3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.03□□□□□ -0.16
TRBV6-8A0A0A6YYG3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms