Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 CA15P2-201ENST00000611168 834 ntBASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 AL162377.1-201ENST00000618844 1793 ntBASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15□□□□□ -0.01
TRAV9-2A0A087WT02 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 FZD10-202ENST00000539839 3282 ntBASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 OR2I1P-207ENST00000453522 948 ntBASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 AC093503.3-201ENST00000624917 2352 ntBASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV9-2A0A087WT02 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 AL031432.3-201ENST00000607698 485 ntBASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 AC099778.1-201ENST00000568593 1911 ntBASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV9-2A0A087WT02 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV9-2A0A087WT02 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV9-2A0A087WT02 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV9-2A0A087WT02 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAV9-2A0A087WT02 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV9-2A0A087WT02 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
TRAV9-2A0A087WT02 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV9-2A0A087WT02 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms