Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 AC233992.3-201ENST00000607491 485 ntBASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 AC105233.4-201ENST00000642045 216 ntBASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 TNXA-203ENST00000507684 2038 ntBASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 AC020763.4-201ENST00000623414 4170 ntBASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 AL035685.1-201ENST00000636663 812 ntBASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV18A0A075B6X5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV18A0A075B6X5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV18A0A075B6X5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV18A0A075B6X5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV18A0A075B6X5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
TRAV18A0A075B6X5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV18A0A075B6X5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV18A0A075B6X5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.34■□□□□ 0.37
TRAV18A0A075B6X5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV18A0A075B6X5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV18A0A075B6X5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV18A0A075B6X5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV18A0A075B6X5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TRAV18A0A075B6X5 MIR2861-201ENST00000636310 90 ntBASIC17.34■□□□□ 0.37
TRAV18A0A075B6X5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV18A0A075B6X5 HCG11-201ENST00000411553 5696 ntBASIC17.34■□□□□ 0.37
TRAV18A0A075B6X5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV18A0A075B6X5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
TRAV18A0A075B6X5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV18A0A075B6X5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV18A0A075B6X5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV18A0A075B6X5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
TRAV18A0A075B6X5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV18A0A075B6X5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV18A0A075B6X5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV18A0A075B6X5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV18A0A075B6X5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TRAV18A0A075B6X5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.33■□□□□ 0.36
TRAV18A0A075B6X5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TRAV18A0A075B6X5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.33■□□□□ 0.36
TRAV18A0A075B6X5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV18A0A075B6X5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAV18A0A075B6X5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV18A0A075B6X5 MIR4767-201ENST00000582827 78 ntBASIC17.33■□□□□ 0.36
TRAV18A0A075B6X5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TRAV18A0A075B6X5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV18A0A075B6X5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV18A0A075B6X5 AC005332.7-201ENST00000614046 2005 ntBASIC17.33■□□□□ 0.36
TRAV18A0A075B6X5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV18A0A075B6X5 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TRAV18A0A075B6X5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.33■□□□□ 0.36
TRAV18A0A075B6X5 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.33■□□□□ 0.36
TRAV18A0A075B6X5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TRAV18A0A075B6X5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms