Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.95■□□□□ 0.78
HS3ST3A1Q9Y663 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
HS3ST3A1Q9Y663 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HS3ST3A1Q9Y663 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.95■□□□□ 0.78
HS3ST3A1Q9Y663 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
HS3ST3A1Q9Y663 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HS3ST3A1Q9Y663 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.95■□□□□ 0.78
HS3ST3A1Q9Y663 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HS3ST3A1Q9Y663 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
HS3ST3A1Q9Y663 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HS3ST3A1Q9Y663 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HS3ST3A1Q9Y663 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.95■□□□□ 0.78
HS3ST3A1Q9Y663 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HS3ST3A1Q9Y663 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 PRKY-204ENST00000533551 1019 ntBASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 MIR4497-201ENST00000583208 89 ntBASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 AL121829.2-201ENST00000620908 328 ntBASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HS3ST3A1Q9Y663 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HS3ST3A1Q9Y663 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HS3ST3A1Q9Y663 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.93■□□□□ 0.78
HS3ST3A1Q9Y663 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.93■□□□□ 0.78
HS3ST3A1Q9Y663 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HS3ST3A1Q9Y663 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.93■□□□□ 0.78
HS3ST3A1Q9Y663 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HS3ST3A1Q9Y663 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.93■□□□□ 0.78
HS3ST3A1Q9Y663 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
HS3ST3A1Q9Y663 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.93■□□□□ 0.78
HS3ST3A1Q9Y663 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HS3ST3A1Q9Y663 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HS3ST3A1Q9Y663 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HS3ST3A1Q9Y663 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HS3ST3A1Q9Y663 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HS3ST3A1Q9Y663 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HS3ST3A1Q9Y663 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 KRASP1-201ENST00000407852 552 ntBASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.92■□□□□ 0.78
HS3ST3A1Q9Y663 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 AC012618.2-201ENST00000428058 849 ntBASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
HS3ST3A1Q9Y663 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HS3ST3A1Q9Y663 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HS3ST3A1Q9Y663 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HS3ST3A1Q9Y663 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms