Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.33■■□□□ 1.01
HCFC2Q9Y5Z7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.33■■□□□ 1.01
HCFC2Q9Y5Z7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.33■■□□□ 1.01
HCFC2Q9Y5Z7 AC124283.5-201ENST00000624661 1809 ntBASIC21.33■■□□□ 1.01
HCFC2Q9Y5Z7 NBPF21P-201ENST00000425093 1451 ntBASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.32■■□□□ 1
HCFC2Q9Y5Z7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HCFC2Q9Y5Z7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.31■■□□□ 1
HCFC2Q9Y5Z7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.31■■□□□ 1
HCFC2Q9Y5Z7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HCFC2Q9Y5Z7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
HCFC2Q9Y5Z7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HCFC2Q9Y5Z7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HCFC2Q9Y5Z7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.31■■□□□ 1
HCFC2Q9Y5Z7 FAM197Y1-201ENST00000421178 764 ntBASIC21.31■■□□□ 1
HCFC2Q9Y5Z7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.31■■□□□ 1
HCFC2Q9Y5Z7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.31■■□□□ 1
HCFC2Q9Y5Z7 AC023632.3-201ENST00000521633 145 ntBASIC21.31■■□□□ 1
HCFC2Q9Y5Z7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
HCFC2Q9Y5Z7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
HCFC2Q9Y5Z7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.31■■□□□ 1
HCFC2Q9Y5Z7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.31■■□□□ 1
HCFC2Q9Y5Z7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.31■■□□□ 1
HCFC2Q9Y5Z7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.31■■□□□ 1
HCFC2Q9Y5Z7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.3■■□□□ 1
HCFC2Q9Y5Z7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.3■■□□□ 1
HCFC2Q9Y5Z7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.3■■□□□ 1
HCFC2Q9Y5Z7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.3■■□□□ 1
HCFC2Q9Y5Z7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HCFC2Q9Y5Z7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.3■■□□□ 1
HCFC2Q9Y5Z7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HCFC2Q9Y5Z7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HCFC2Q9Y5Z7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.3■■□□□ 1
HCFC2Q9Y5Z7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HCFC2Q9Y5Z7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HCFC2Q9Y5Z7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.3■■□□□ 1
HCFC2Q9Y5Z7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.3■■□□□ 1
HCFC2Q9Y5Z7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.3■■□□□ 1
HCFC2Q9Y5Z7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HCFC2Q9Y5Z7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HCFC2Q9Y5Z7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.3■■□□□ 1
HCFC2Q9Y5Z7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
HCFC2Q9Y5Z7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
HCFC2Q9Y5Z7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HCFC2Q9Y5Z7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
HCFC2Q9Y5Z7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.29■■□□□ 1
HCFC2Q9Y5Z7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.29■■□□□ 1
HCFC2Q9Y5Z7 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.29■■□□□ 1
HCFC2Q9Y5Z7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
HCFC2Q9Y5Z7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.29■■□□□ 1
HCFC2Q9Y5Z7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.29■■□□□ 1
HCFC2Q9Y5Z7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.29■■□□□ 1
HCFC2Q9Y5Z7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.29■■□□□ 1
HCFC2Q9Y5Z7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
HCFC2Q9Y5Z7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
HCFC2Q9Y5Z7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HCFC2Q9Y5Z7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HCFC2Q9Y5Z7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
HCFC2Q9Y5Z7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 AC011484.1-201ENST00000377652 1995 ntBASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 KRT18P35-201ENST00000510488 1269 ntBASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.28■■□□□ 1
HCFC2Q9Y5Z7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms