Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 AL512625.2-201ENST00000417533 625 ntBASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 AC083880.1-201ENST00000608266 535 ntBASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 AP006294.2-201ENST00000641667 209 ntBASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
PCDHGA4Q9Y5G9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 AL049796.1-201ENST00000565336 1766 ntBASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 BX276092.2-201ENST00000417668 665 ntBASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PCDHGA4Q9Y5G9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 ESRRAP1-201ENST00000400596 1257 ntBASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 GCSHP5-201ENST00000443090 522 ntBASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHGA4Q9Y5G9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
PCDHGA4Q9Y5G9 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA4Q9Y5G9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA4Q9Y5G9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA4Q9Y5G9 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PCDHGA4Q9Y5G9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA4Q9Y5G9 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHGA4Q9Y5G9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHGA4Q9Y5G9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PCDHGA4Q9Y5G9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDHGA4Q9Y5G9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA4Q9Y5G9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.89■□□□□ 0.77
PCDHGA4Q9Y5G9 Z99916.3-201ENST00000623422 1080 ntBASIC19.89■□□□□ 0.77
PCDHGA4Q9Y5G9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA4Q9Y5G9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHGA4Q9Y5G9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHGA4Q9Y5G9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PCDHGA4Q9Y5G9 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 MYC-209ENST00000641252 345 ntBASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHGA4Q9Y5G9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms