Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHGA6Q9Y5G7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 AL355472.2-201ENST00000422958 438 ntBASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 AL589743.5-201ENST00000616611 1050 ntBASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 HLA-B-256ENST00000639848 1089 ntBASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHGA6Q9Y5G7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 AC060766.5-201ENST00000590539 871 ntBASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHGA6Q9Y5G7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHGA6Q9Y5G7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 AC142381.4-202ENST00000563973 229 ntBASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHGA6Q9Y5G7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.44■□□□□ 0.7
PCDHGA6Q9Y5G7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA6Q9Y5G7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA6Q9Y5G7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA6Q9Y5G7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA6Q9Y5G7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA6Q9Y5G7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA6Q9Y5G7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDHGA6Q9Y5G7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms