Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LSM4Q9Y4Z0 SMG8-203ENST00000578922 2178 ntBASIC16.17■□□□□ 0.18
LSM4Q9Y4Z0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSM4Q9Y4Z0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.17■□□□□ 0.18
LSM4Q9Y4Z0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSM4Q9Y4Z0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LSM4Q9Y4Z0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LSM4Q9Y4Z0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LSM4Q9Y4Z0 ABHD17AP1-201ENST00000358206 933 ntBASIC16.17■□□□□ 0.18
LSM4Q9Y4Z0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC16.17■□□□□ 0.18
LSM4Q9Y4Z0 AL355802.2-201ENST00000402069 882 ntBASIC16.17■□□□□ 0.18
LSM4Q9Y4Z0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.17■□□□□ 0.18
LSM4Q9Y4Z0 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.17■□□□□ 0.18
LSM4Q9Y4Z0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LSM4Q9Y4Z0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.17■□□□□ 0.18
LSM4Q9Y4Z0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LSM4Q9Y4Z0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
LSM4Q9Y4Z0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 AC092720.2-201ENST00000602388 1665 ntBASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.16■□□□□ 0.18
LSM4Q9Y4Z0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 AC079140.4-201ENST00000507448 529 ntBASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 EEF1DP3-203ENST00000566025 782 ntBASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LSM4Q9Y4Z0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LSM4Q9Y4Z0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms