Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RCL1Q9Y2P8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
RCL1Q9Y2P8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RCL1Q9Y2P8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RCL1Q9Y2P8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.54■□□□□ 0.24
RCL1Q9Y2P8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RCL1Q9Y2P8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RCL1Q9Y2P8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 AC120498.9-201ENST00000339021 3867 ntBASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 AC009237.3-201ENST00000393279 1427 ntBASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RCL1Q9Y2P8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RCL1Q9Y2P8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RCL1Q9Y2P8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.52■□□□□ 0.24
RCL1Q9Y2P8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RCL1Q9Y2P8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RCL1Q9Y2P8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.52■□□□□ 0.24
RCL1Q9Y2P8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RCL1Q9Y2P8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RCL1Q9Y2P8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.52■□□□□ 0.24
RCL1Q9Y2P8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RCL1Q9Y2P8 AC005332.7-201ENST00000614046 2005 ntBASIC16.52■□□□□ 0.24
RCL1Q9Y2P8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
RCL1Q9Y2P8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RCL1Q9Y2P8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RCL1Q9Y2P8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RCL1Q9Y2P8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.52■□□□□ 0.24
RCL1Q9Y2P8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RCL1Q9Y2P8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
RCL1Q9Y2P8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RCL1Q9Y2P8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RCL1Q9Y2P8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RCL1Q9Y2P8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.52■□□□□ 0.23
RCL1Q9Y2P8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.52■□□□□ 0.23
RCL1Q9Y2P8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RCL1Q9Y2P8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 MIR3621-201ENST00000580529 85 ntBASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 AC026471.1-201ENST00000564629 3026 ntBASIC16.51■□□□□ 0.23
RCL1Q9Y2P8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 FXN-202ENST00000396364 980 ntTSL 5 BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCL1Q9Y2P8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 626.8 ms