Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NCKAP1Q9Y2A7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCKAP1Q9Y2A7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
NCKAP1Q9Y2A7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCKAP1Q9Y2A7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.33■□□□□ 0.85
NCKAP1Q9Y2A7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCKAP1Q9Y2A7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
NCKAP1Q9Y2A7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NCKAP1Q9Y2A7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
NCKAP1Q9Y2A7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NCKAP1Q9Y2A7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.33■□□□□ 0.85
NCKAP1Q9Y2A7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.33■□□□□ 0.85
NCKAP1Q9Y2A7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NCKAP1Q9Y2A7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
NCKAP1Q9Y2A7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
NCKAP1Q9Y2A7 AC027702.1-201ENST00000563810 1770 ntBASIC20.33■□□□□ 0.84
NCKAP1Q9Y2A7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.33■□□□□ 0.84
NCKAP1Q9Y2A7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NCKAP1Q9Y2A7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCKAP1Q9Y2A7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCKAP1Q9Y2A7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCKAP1Q9Y2A7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
NCKAP1Q9Y2A7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NCKAP1Q9Y2A7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.32■□□□□ 0.84
NCKAP1Q9Y2A7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCKAP1Q9Y2A7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NCKAP1Q9Y2A7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NCKAP1Q9Y2A7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NCKAP1Q9Y2A7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
NCKAP1Q9Y2A7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NCKAP1Q9Y2A7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.32■□□□□ 0.84
NCKAP1Q9Y2A7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.32■□□□□ 0.84
NCKAP1Q9Y2A7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NCKAP1Q9Y2A7 MTDHP1-201ENST00000605323 784 ntBASIC20.32■□□□□ 0.84
NCKAP1Q9Y2A7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.32■□□□□ 0.84
NCKAP1Q9Y2A7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.32■□□□□ 0.84
NCKAP1Q9Y2A7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCKAP1Q9Y2A7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 AC239809.2-201ENST00000415381 517 ntBASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 MIR2861-201ENST00000636310 90 ntBASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 AL023875.1-201ENST00000640777 796 ntBASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.3■□□□□ 0.84
NCKAP1Q9Y2A7 AC121338.2-201ENST00000622535 1744 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms