Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 AC138907.5-202ENST00000569484 235 ntBASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HHLA3Q9XRX5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
HHLA3Q9XRX5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.77□□□□□ -0.04
HHLA3Q9XRX5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.77□□□□□ -0.04
HHLA3Q9XRX5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HHLA3Q9XRX5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
HHLA3Q9XRX5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HHLA3Q9XRX5 AC116562.4-201ENST00000641316 2276 ntBASIC14.77□□□□□ -0.04
HHLA3Q9XRX5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HHLA3Q9XRX5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HHLA3Q9XRX5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HHLA3Q9XRX5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HHLA3Q9XRX5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HHLA3Q9XRX5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
HHLA3Q9XRX5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HHLA3Q9XRX5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
HHLA3Q9XRX5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HHLA3Q9XRX5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
HHLA3Q9XRX5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HHLA3Q9XRX5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HHLA3Q9XRX5 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC14.77□□□□□ -0.05
HHLA3Q9XRX5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HHLA3Q9XRX5 AC034268.1-201ENST00000441047 882 ntBASIC14.77□□□□□ -0.05
HHLA3Q9XRX5 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.77□□□□□ -0.05
HHLA3Q9XRX5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC14.77□□□□□ -0.05
HHLA3Q9XRX5 AC104187.1-201ENST00000607510 612 ntBASIC14.77□□□□□ -0.05
HHLA3Q9XRX5 MIR6821-201ENST00000617625 74 ntBASIC14.77□□□□□ -0.05
HHLA3Q9XRX5 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HHLA3Q9XRX5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
HHLA3Q9XRX5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HHLA3Q9XRX5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HHLA3Q9XRX5 AC027702.1-201ENST00000563810 1770 ntBASIC14.77□□□□□ -0.05
HHLA3Q9XRX5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HHLA3Q9XRX5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
HHLA3Q9XRX5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.77□□□□□ -0.05
HHLA3Q9XRX5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 DUX4L2-201ENST00000561772 1275 ntBASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 DUX4L6-201ENST00000626483 1275 ntBASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 DUX4L1-201ENST00000627662 1275 ntBASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 DUX4L8-201ENST00000629013 1275 ntBASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 DUX4L3-201ENST00000630187 1275 ntBASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 DUX4L7-201ENST00000630678 1275 ntBASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 DUX4L5-201ENST00000630834 1275 ntBASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 AP000974.1-201ENST00000623909 2387 ntBASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HHLA3Q9XRX5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 TNXA-203ENST00000507684 2038 ntBASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.75□□□□□ -0.05
HHLA3Q9XRX5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms