Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN2Q9UHD9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 AC079598.2-202ENST00000546624 1451 ntBASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.05■□□□□ 0.32
UBQLN2Q9UHD9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 AP004607.7-201ENST00000527152 1677 ntBASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBQLN2Q9UHD9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 AL117332.1-201ENST00000622628 974 ntBASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 AC125437.2-201ENST00000625180 2167 ntBASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 AIRN-201ENST00000601203 4374 ntBASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
UBQLN2Q9UHD9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
UBQLN2Q9UHD9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN2Q9UHD9 AC005703.6-201ENST00000623265 1329 ntBASIC17.02■□□□□ 0.32
UBQLN2Q9UHD9 LINC01529-204ENST00000636474 1715 ntBASIC17.02■□□□□ 0.32
UBQLN2Q9UHD9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.02■□□□□ 0.32
UBQLN2Q9UHD9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBQLN2Q9UHD9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
UBQLN2Q9UHD9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.02■□□□□ 0.32
UBQLN2Q9UHD9 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.02■□□□□ 0.32
UBQLN2Q9UHD9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms