Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC083849.1-201ENST00000615227 514 ntBASIC32.71■■■□□ 2.83
RIMBP3Q9UFD9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
RIMBP3Q9UFD9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
RIMBP3Q9UFD9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC32.71■■■□□ 2.83
RIMBP3Q9UFD9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC32.71■■■□□ 2.83
RIMBP3Q9UFD9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC32.71■■■□□ 2.83
RIMBP3Q9UFD9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC32.7■■■□□ 2.83
RIMBP3Q9UFD9 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
RIMBP3Q9UFD9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
RIMBP3Q9UFD9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
RIMBP3Q9UFD9 AL121749.1-202ENST00000609313 2153 ntBASIC32.7■■■□□ 2.82
RIMBP3Q9UFD9 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC32.7■■■□□ 2.82
RIMBP3Q9UFD9 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
RIMBP3Q9UFD9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC32.69■■■□□ 2.82
RIMBP3Q9UFD9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
RIMBP3Q9UFD9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
RIMBP3Q9UFD9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
RIMBP3Q9UFD9 FSCN1P1-201ENST00000568912 1481 ntBASIC32.69■■■□□ 2.82
RIMBP3Q9UFD9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC32.69■■■□□ 2.82
RIMBP3Q9UFD9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
RIMBP3Q9UFD9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
RIMBP3Q9UFD9 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
RIMBP3Q9UFD9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC32.69■■■□□ 2.82
RIMBP3Q9UFD9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC32.69■■■□□ 2.82
RIMBP3Q9UFD9 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC32.69■■■□□ 2.82
RIMBP3Q9UFD9 AL031985.4-201ENST00000642138 673 ntBASIC32.69■■■□□ 2.82
RIMBP3Q9UFD9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
RIMBP3Q9UFD9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
RIMBP3Q9UFD9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
RIMBP3Q9UFD9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
RIMBP3Q9UFD9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
RIMBP3Q9UFD9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC32.68■■■□□ 2.82
RIMBP3Q9UFD9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC32.68■■■□□ 2.82
RIMBP3Q9UFD9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
RIMBP3Q9UFD9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
RIMBP3Q9UFD9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
RIMBP3Q9UFD9 AC116050.2-201ENST00000612102 1779 ntBASIC32.67■■■□□ 2.82
RIMBP3Q9UFD9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
RIMBP3Q9UFD9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC32.67■■■□□ 2.82
RIMBP3Q9UFD9 PNN-205ENST00000556530 601 ntTSL 2 BASIC32.67■■■□□ 2.82
RIMBP3Q9UFD9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
RIMBP3Q9UFD9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
RIMBP3Q9UFD9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
RIMBP3Q9UFD9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
RIMBP3Q9UFD9 B3GAT3P1-201ENST00000471720 806 ntBASIC32.66■■■□□ 2.82
RIMBP3Q9UFD9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC32.66■■■□□ 2.82
RIMBP3Q9UFD9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
RIMBP3Q9UFD9 AC138932.3-201ENST00000567634 1902 ntBASIC32.66■■■□□ 2.82
RIMBP3Q9UFD9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC32.66■■■□□ 2.82
RIMBP3Q9UFD9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
RIMBP3Q9UFD9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
RIMBP3Q9UFD9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC32.66■■■□□ 2.82
RIMBP3Q9UFD9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC32.66■■■□□ 2.82
RIMBP3Q9UFD9 ABBA01031674.1-201ENST00000635145 728 ntBASIC32.66■■■□□ 2.82
RIMBP3Q9UFD9 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
RIMBP3Q9UFD9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC32.65■■■□□ 2.82
RIMBP3Q9UFD9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
RIMBP3Q9UFD9 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC32.65■■■□□ 2.82
RIMBP3Q9UFD9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
RIMBP3Q9UFD9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC32.65■■■□□ 2.82
RIMBP3Q9UFD9 AL845331.1-201ENST00000424978 1190 ntBASIC32.65■■■□□ 2.82
RIMBP3Q9UFD9 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC32.65■■■□□ 2.82
RIMBP3Q9UFD9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
RIMBP3Q9UFD9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC32.65■■■□□ 2.82
RIMBP3Q9UFD9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC32.65■■■□□ 2.82
RIMBP3Q9UFD9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
RIMBP3Q9UFD9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
RIMBP3Q9UFD9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
RIMBP3Q9UFD9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
RIMBP3Q9UFD9 NPAP1P7-201ENST00000613027 823 ntBASIC32.64■■■□□ 2.82
RIMBP3Q9UFD9 AC011558.1-201ENST00000623459 338 ntBASIC32.64■■■□□ 2.82
RIMBP3Q9UFD9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC32.64■■■□□ 2.82
RIMBP3Q9UFD9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC32.64■■■□□ 2.82
RIMBP3Q9UFD9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC32.64■■■□□ 2.82
RIMBP3Q9UFD9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC32.64■■■□□ 2.82
RIMBP3Q9UFD9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
RIMBP3Q9UFD9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
RIMBP3Q9UFD9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
RIMBP3Q9UFD9 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
RIMBP3Q9UFD9 AC009078.2-202ENST00000463353 338 ntBASIC32.63■■■□□ 2.81
RIMBP3Q9UFD9 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC32.63■■■□□ 2.81
RIMBP3Q9UFD9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC32.63■■■□□ 2.81
RIMBP3Q9UFD9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC32.63■■■□□ 2.81
RIMBP3Q9UFD9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
RIMBP3Q9UFD9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
RIMBP3Q9UFD9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC32.63■■■□□ 2.81
RIMBP3Q9UFD9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
RIMBP3Q9UFD9 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC32.62■■■□□ 2.81
RIMBP3Q9UFD9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC32.62■■■□□ 2.81
RIMBP3Q9UFD9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
RIMBP3Q9UFD9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
RIMBP3Q9UFD9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
RIMBP3Q9UFD9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC32.62■■■□□ 2.81
RIMBP3Q9UFD9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC32.62■■■□□ 2.81
RIMBP3Q9UFD9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC32.62■■■□□ 2.81
RIMBP3Q9UFD9 VENTXP5-201ENST00000523979 775 ntBASIC32.62■■■□□ 2.81
RIMBP3Q9UFD9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC32.62■■■□□ 2.81
RIMBP3Q9UFD9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC32.62■■■□□ 2.81
RIMBP3Q9UFD9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
RIMBP3Q9UFD9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms