Protein–RNA interactions for Protein: Q9NUM4

TMEM106B, Transmembrane protein 106B, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106BQ9NUM4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM106BQ9NUM4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TMEM106BQ9NUM4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM106BQ9NUM4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM106BQ9NUM4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM106BQ9NUM4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM106BQ9NUM4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TMEM106BQ9NUM4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 AC006128.1-201ENST00000624704 1661 ntBASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 RNA5SP413-201ENST00000516373 109 ntBASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 C2orf69P4-201ENST00000565394 541 ntBASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM106BQ9NUM4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 KRT8P36-201ENST00000489121 1440 ntBASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TMEM106BQ9NUM4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.11■□□□□ 0.33
TMEM106BQ9NUM4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TMEM106BQ9NUM4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms