Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ZFYVE28Q9HCC9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZFYVE28Q9HCC9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZFYVE28Q9HCC9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.3■■□□□ 1.32
ZFYVE28Q9HCC9 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZFYVE28Q9HCC9 AC116562.2-201ENST00000507042 360 ntBASIC23.3■■□□□ 1.32
ZFYVE28Q9HCC9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC23.3■■□□□ 1.32
ZFYVE28Q9HCC9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.3■■□□□ 1.32
ZFYVE28Q9HCC9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZFYVE28Q9HCC9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC23.3■■□□□ 1.32
ZFYVE28Q9HCC9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.3■■□□□ 1.32
ZFYVE28Q9HCC9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC23.3■■□□□ 1.32
ZFYVE28Q9HCC9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZFYVE28Q9HCC9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ZFYVE28Q9HCC9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.3■■□□□ 1.32
ZFYVE28Q9HCC9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.29■■□□□ 1.32
ZFYVE28Q9HCC9 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.29■■□□□ 1.32
ZFYVE28Q9HCC9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.29■■□□□ 1.32
ZFYVE28Q9HCC9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.29■■□□□ 1.32
ZFYVE28Q9HCC9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZFYVE28Q9HCC9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZFYVE28Q9HCC9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZFYVE28Q9HCC9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZFYVE28Q9HCC9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.29■■□□□ 1.32
ZFYVE28Q9HCC9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.29■■□□□ 1.32
ZFYVE28Q9HCC9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
ZFYVE28Q9HCC9 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZFYVE28Q9HCC9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZFYVE28Q9HCC9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ZFYVE28Q9HCC9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
ZFYVE28Q9HCC9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ZFYVE28Q9HCC9 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.28■■□□□ 1.32
ZFYVE28Q9HCC9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.28■■□□□ 1.32
ZFYVE28Q9HCC9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
ZFYVE28Q9HCC9 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.28■■□□□ 1.32
ZFYVE28Q9HCC9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZFYVE28Q9HCC9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.28■■□□□ 1.32
ZFYVE28Q9HCC9 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC23.28■■□□□ 1.32
ZFYVE28Q9HCC9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC23.28■■□□□ 1.32
ZFYVE28Q9HCC9 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC23.28■■□□□ 1.32
ZFYVE28Q9HCC9 CR392000.1-201ENST00000624770 1228 ntBASIC23.28■■□□□ 1.32
ZFYVE28Q9HCC9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZFYVE28Q9HCC9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ZFYVE28Q9HCC9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
ZFYVE28Q9HCC9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZFYVE28Q9HCC9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZFYVE28Q9HCC9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ZFYVE28Q9HCC9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.27■■□□□ 1.32
ZFYVE28Q9HCC9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC23.27■■□□□ 1.32
ZFYVE28Q9HCC9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.27■■□□□ 1.32
ZFYVE28Q9HCC9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.27■■□□□ 1.32
ZFYVE28Q9HCC9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
ZFYVE28Q9HCC9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
ZFYVE28Q9HCC9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZFYVE28Q9HCC9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZFYVE28Q9HCC9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZFYVE28Q9HCC9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZFYVE28Q9HCC9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZFYVE28Q9HCC9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
ZFYVE28Q9HCC9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZFYVE28Q9HCC9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC23.26■■□□□ 1.31
ZFYVE28Q9HCC9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZFYVE28Q9HCC9 KSR1P1-201ENST00000446298 240 ntBASIC23.26■■□□□ 1.31
ZFYVE28Q9HCC9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.26■■□□□ 1.31
ZFYVE28Q9HCC9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.26■■□□□ 1.31
ZFYVE28Q9HCC9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZFYVE28Q9HCC9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC23.26■■□□□ 1.31
ZFYVE28Q9HCC9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
ZFYVE28Q9HCC9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ZFYVE28Q9HCC9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ZFYVE28Q9HCC9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.25■■□□□ 1.31
ZFYVE28Q9HCC9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZFYVE28Q9HCC9 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
ZFYVE28Q9HCC9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC23.25■■□□□ 1.31
ZFYVE28Q9HCC9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.25■■□□□ 1.31
ZFYVE28Q9HCC9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
ZFYVE28Q9HCC9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC23.25■■□□□ 1.31
ZFYVE28Q9HCC9 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
ZFYVE28Q9HCC9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC23.25■■□□□ 1.31
ZFYVE28Q9HCC9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZFYVE28Q9HCC9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZFYVE28Q9HCC9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ZFYVE28Q9HCC9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZFYVE28Q9HCC9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
ZFYVE28Q9HCC9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZFYVE28Q9HCC9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
ZFYVE28Q9HCC9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZFYVE28Q9HCC9 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.24■■□□□ 1.31
ZFYVE28Q9HCC9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZFYVE28Q9HCC9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.24■■□□□ 1.31
ZFYVE28Q9HCC9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZFYVE28Q9HCC9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ZFYVE28Q9HCC9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.24■■□□□ 1.31
ZFYVE28Q9HCC9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.24■■□□□ 1.31
ZFYVE28Q9HCC9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.24■■□□□ 1.31
ZFYVE28Q9HCC9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.24■■□□□ 1.31
ZFYVE28Q9HCC9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ZFYVE28Q9HCC9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.24■■□□□ 1.31
ZFYVE28Q9HCC9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
ZFYVE28Q9HCC9 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms