Protein–RNA interactions for Protein: Q9H7L9

SUDS3, Sin3 histone deacetylase corepressor complex component SDS3, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3Q9H7L9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SUDS3Q9H7L9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SUDS3Q9H7L9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SUDS3Q9H7L9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.64■□□□□ 0.89
SUDS3Q9H7L9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.64■□□□□ 0.89
SUDS3Q9H7L9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.64■□□□□ 0.89
SUDS3Q9H7L9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SUDS3Q9H7L9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SUDS3Q9H7L9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
SUDS3Q9H7L9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.64■□□□□ 0.89
SUDS3Q9H7L9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SUDS3Q9H7L9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SUDS3Q9H7L9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SUDS3Q9H7L9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SUDS3Q9H7L9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.63■□□□□ 0.89
SUDS3Q9H7L9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUDS3Q9H7L9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUDS3Q9H7L9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUDS3Q9H7L9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUDS3Q9H7L9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.63■□□□□ 0.89
SUDS3Q9H7L9 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.63■□□□□ 0.89
SUDS3Q9H7L9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SUDS3Q9H7L9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.63■□□□□ 0.89
SUDS3Q9H7L9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.63■□□□□ 0.89
SUDS3Q9H7L9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.63■□□□□ 0.89
SUDS3Q9H7L9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUDS3Q9H7L9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.63■□□□□ 0.89
SUDS3Q9H7L9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SUDS3Q9H7L9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
SUDS3Q9H7L9 AC068338.2-201ENST00000563278 1430 ntBASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 AC091799.1-201ENST00000422823 811 ntBASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SUDS3Q9H7L9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SUDS3Q9H7L9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SUDS3Q9H7L9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SUDS3Q9H7L9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SUDS3Q9H7L9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SUDS3Q9H7L9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SUDS3Q9H7L9 SLC29A4P1-201ENST00000398760 971 ntBASIC20.61■□□□□ 0.89
SUDS3Q9H7L9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.61■□□□□ 0.89
SUDS3Q9H7L9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.61■□□□□ 0.89
SUDS3Q9H7L9 AF201337.1-201ENST00000520239 748 ntBASIC20.61■□□□□ 0.89
SUDS3Q9H7L9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.61■□□□□ 0.89
SUDS3Q9H7L9 AC016405.3-201ENST00000607710 860 ntBASIC20.61■□□□□ 0.89
SUDS3Q9H7L9 AC243732.1-201ENST00000612648 864 ntBASIC20.61■□□□□ 0.89
SUDS3Q9H7L9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SUDS3Q9H7L9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
SUDS3Q9H7L9 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SUDS3Q9H7L9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SUDS3Q9H7L9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SUDS3Q9H7L9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SUDS3Q9H7L9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
SUDS3Q9H7L9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SUDS3Q9H7L9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SUDS3Q9H7L9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SUDS3Q9H7L9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SUDS3Q9H7L9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SUDS3Q9H7L9 LINC01006-201ENST00000333319 2292 ntBASIC20.6■□□□□ 0.89
SUDS3Q9H7L9 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SUDS3Q9H7L9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.6■□□□□ 0.89
SUDS3Q9H7L9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SUDS3Q9H7L9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.6■□□□□ 0.89
SUDS3Q9H7L9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.6■□□□□ 0.89
SUDS3Q9H7L9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.6■□□□□ 0.89
SUDS3Q9H7L9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SUDS3Q9H7L9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SUDS3Q9H7L9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SUDS3Q9H7L9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SUDS3Q9H7L9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.59■□□□□ 0.89
SUDS3Q9H7L9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SUDS3Q9H7L9 AC116050.2-201ENST00000612102 1779 ntBASIC20.59■□□□□ 0.89
SUDS3Q9H7L9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SUDS3Q9H7L9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SUDS3Q9H7L9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SUDS3Q9H7L9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SUDS3Q9H7L9 FP700111.2-201ENST00000619190 1892 ntBASIC20.59■□□□□ 0.89
SUDS3Q9H7L9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.59■□□□□ 0.89
SUDS3Q9H7L9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SUDS3Q9H7L9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.59■□□□□ 0.89
SUDS3Q9H7L9 AL138781.1-201ENST00000566567 1274 ntBASIC20.59■□□□□ 0.89
SUDS3Q9H7L9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SUDS3Q9H7L9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms