Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBB1Q9H4B7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TUBB1Q9H4B7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBB1Q9H4B7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.54■□□□□ 0.72
TUBB1Q9H4B7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.54■□□□□ 0.72
TUBB1Q9H4B7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 UBE2DNL-204ENST00000602536 740 ntBASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TUBB1Q9H4B7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB1Q9H4B7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB1Q9H4B7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB1Q9H4B7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.52■□□□□ 0.72
TUBB1Q9H4B7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB1Q9H4B7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB1Q9H4B7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB1Q9H4B7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.52■□□□□ 0.72
TUBB1Q9H4B7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB1Q9H4B7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB1Q9H4B7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TUBB1Q9H4B7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB1Q9H4B7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB1Q9H4B7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB1Q9H4B7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB1Q9H4B7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TUBB1Q9H4B7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
TUBB1Q9H4B7 BX119927.1-201ENST00000636596 1552 ntBASIC19.52■□□□□ 0.71
TUBB1Q9H4B7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
TUBB1Q9H4B7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TUBB1Q9H4B7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB1Q9H4B7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.51■□□□□ 0.71
TUBB1Q9H4B7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB1Q9H4B7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB1Q9H4B7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
TUBB1Q9H4B7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB1Q9H4B7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.51■□□□□ 0.71
TUBB1Q9H4B7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.51■□□□□ 0.71
TUBB1Q9H4B7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.51■□□□□ 0.71
TUBB1Q9H4B7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB1Q9H4B7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
TUBB1Q9H4B7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.51■□□□□ 0.71
TUBB1Q9H4B7 AC116562.4-201ENST00000641316 2276 ntBASIC19.51■□□□□ 0.71
TUBB1Q9H4B7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB1Q9H4B7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB1Q9H4B7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TUBB1Q9H4B7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.51■□□□□ 0.71
TUBB1Q9H4B7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.51■□□□□ 0.71
TUBB1Q9H4B7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 KRT19P1-201ENST00000405746 1186 ntBASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 FAM21FP-204ENST00000608637 956 ntBASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TUBB1Q9H4B7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB1Q9H4B7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB1Q9H4B7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB1Q9H4B7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB1Q9H4B7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TUBB1Q9H4B7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB1Q9H4B7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.49■□□□□ 0.71
TUBB1Q9H4B7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TUBB1Q9H4B7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms