Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CHMP4BQ9H444 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHMP4BQ9H444 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC25.56■■□□□ 1.68
CHMP4BQ9H444 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CHMP4BQ9H444 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
CHMP4BQ9H444 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHMP4BQ9H444 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC25.56■■□□□ 1.68
CHMP4BQ9H444 CYP2T1P-201ENST00000432607 1285 ntBASIC25.56■■□□□ 1.68
CHMP4BQ9H444 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.56■■□□□ 1.68
CHMP4BQ9H444 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC25.56■■□□□ 1.68
CHMP4BQ9H444 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC25.56■■□□□ 1.68
CHMP4BQ9H444 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHMP4BQ9H444 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
CHMP4BQ9H444 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
CHMP4BQ9H444 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CHMP4BQ9H444 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHMP4BQ9H444 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC25.55■■□□□ 1.68
CHMP4BQ9H444 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
CHMP4BQ9H444 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CHMP4BQ9H444 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC25.55■■□□□ 1.68
CHMP4BQ9H444 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHMP4BQ9H444 MIR935-201ENST00000401179 91 ntBASIC25.55■■□□□ 1.68
CHMP4BQ9H444 AL512625.2-201ENST00000417533 625 ntBASIC25.55■■□□□ 1.68
CHMP4BQ9H444 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.55■■□□□ 1.68
CHMP4BQ9H444 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHMP4BQ9H444 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHMP4BQ9H444 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHMP4BQ9H444 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHMP4BQ9H444 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHMP4BQ9H444 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHMP4BQ9H444 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CHMP4BQ9H444 KRT18P68-201ENST00000392293 1000 ntBASIC25.54■■□□□ 1.68
CHMP4BQ9H444 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
CHMP4BQ9H444 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CHMP4BQ9H444 AC073130.3-201ENST00000624389 2278 ntBASIC25.54■■□□□ 1.68
CHMP4BQ9H444 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHMP4BQ9H444 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC25.54■■□□□ 1.68
CHMP4BQ9H444 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC25.54■■□□□ 1.68
CHMP4BQ9H444 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHMP4BQ9H444 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC25.54■■□□□ 1.68
CHMP4BQ9H444 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC25.54■■□□□ 1.68
CHMP4BQ9H444 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC25.54■■□□□ 1.68
CHMP4BQ9H444 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC25.54■■□□□ 1.68
CHMP4BQ9H444 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHMP4BQ9H444 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHMP4BQ9H444 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CHMP4BQ9H444 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC25.53■■□□□ 1.68
CHMP4BQ9H444 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CHMP4BQ9H444 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHMP4BQ9H444 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
CHMP4BQ9H444 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CHMP4BQ9H444 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHMP4BQ9H444 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC25.53■■□□□ 1.68
CHMP4BQ9H444 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.53■■□□□ 1.68
CHMP4BQ9H444 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.53■■□□□ 1.68
CHMP4BQ9H444 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
CHMP4BQ9H444 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHMP4BQ9H444 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CHMP4BQ9H444 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CHMP4BQ9H444 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC25.53■■□□□ 1.68
CHMP4BQ9H444 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHMP4BQ9H444 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHMP4BQ9H444 DPP3P2-201ENST00000416030 1696 ntBASIC25.52■■□□□ 1.68
CHMP4BQ9H444 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHMP4BQ9H444 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC25.52■■□□□ 1.68
CHMP4BQ9H444 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC25.52■■□□□ 1.68
CHMP4BQ9H444 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHMP4BQ9H444 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC25.52■■□□□ 1.68
CHMP4BQ9H444 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHMP4BQ9H444 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC25.52■■□□□ 1.68
CHMP4BQ9H444 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
CHMP4BQ9H444 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC25.52■■□□□ 1.68
CHMP4BQ9H444 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC25.52■■□□□ 1.68
CHMP4BQ9H444 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHMP4BQ9H444 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHMP4BQ9H444 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CHMP4BQ9H444 GCK-205ENST00000437084 1385 ntTSL 5 BASIC25.52■■□□□ 1.68
CHMP4BQ9H444 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHMP4BQ9H444 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC25.52■■□□□ 1.68
CHMP4BQ9H444 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHMP4BQ9H444 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
CHMP4BQ9H444 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC25.51■■□□□ 1.67
CHMP4BQ9H444 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CHMP4BQ9H444 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
CHMP4BQ9H444 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.51■■□□□ 1.67
CHMP4BQ9H444 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CHMP4BQ9H444 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
CHMP4BQ9H444 CYP2T3P-201ENST00000601990 817 ntBASIC25.51■■□□□ 1.67
CHMP4BQ9H444 AL137784.2-201ENST00000607332 1000 ntBASIC25.51■■□□□ 1.67
CHMP4BQ9H444 AC105020.6-201ENST00000621523 1217 ntBASIC25.51■■□□□ 1.67
CHMP4BQ9H444 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
CHMP4BQ9H444 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CHMP4BQ9H444 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CHMP4BQ9H444 ADM-207ENST00000530439 1839 ntTSL 2 BASIC25.51■■□□□ 1.67
CHMP4BQ9H444 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CHMP4BQ9H444 MED17-221ENST00000639724 2317 ntTSL 5 BASIC25.51■■□□□ 1.67
CHMP4BQ9H444 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CHMP4BQ9H444 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CHMP4BQ9H444 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CHMP4BQ9H444 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms