Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPTBN4Q9H254 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.56■□□□□ 0.72
SPTBN4Q9H254 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.56■□□□□ 0.72
SPTBN4Q9H254 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SPTBN4Q9H254 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SPTBN4Q9H254 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPTBN4Q9H254 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.56■□□□□ 0.72
SPTBN4Q9H254 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTBN4Q9H254 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTBN4Q9H254 AC004812.2-201ENST00000611079 2094 ntBASIC19.55■□□□□ 0.72
SPTBN4Q9H254 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTBN4Q9H254 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SPTBN4Q9H254 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.55■□□□□ 0.72
SPTBN4Q9H254 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPTBN4Q9H254 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SPTBN4Q9H254 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTBN4Q9H254 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTBN4Q9H254 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTBN4Q9H254 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.55■□□□□ 0.72
SPTBN4Q9H254 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.55■□□□□ 0.72
SPTBN4Q9H254 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SPTBN4Q9H254 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.55■□□□□ 0.72
SPTBN4Q9H254 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SPTBN4Q9H254 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTBN4Q9H254 CYP21A1P-202ENST00000354927 1481 ntBASIC19.55■□□□□ 0.72
SPTBN4Q9H254 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.54■□□□□ 0.72
SPTBN4Q9H254 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTBN4Q9H254 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.54■□□□□ 0.72
SPTBN4Q9H254 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SPTBN4Q9H254 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTBN4Q9H254 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTBN4Q9H254 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.54■□□□□ 0.72
SPTBN4Q9H254 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SPTBN4Q9H254 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.54■□□□□ 0.72
SPTBN4Q9H254 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTBN4Q9H254 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SPTBN4Q9H254 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTBN4Q9H254 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SPTBN4Q9H254 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.53■□□□□ 0.72
SPTBN4Q9H254 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTBN4Q9H254 KRT18P13-201ENST00000400056 1290 ntBASIC19.53■□□□□ 0.72
SPTBN4Q9H254 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SPTBN4Q9H254 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTBN4Q9H254 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTBN4Q9H254 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SPTBN4Q9H254 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTBN4Q9H254 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SPTBN4Q9H254 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.53■□□□□ 0.72
SPTBN4Q9H254 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SPTBN4Q9H254 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPTBN4Q9H254 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SPTBN4Q9H254 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.52■□□□□ 0.72
SPTBN4Q9H254 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.52■□□□□ 0.72
SPTBN4Q9H254 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPTBN4Q9H254 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.52■□□□□ 0.72
SPTBN4Q9H254 AL121749.1-202ENST00000609313 2153 ntBASIC19.52■□□□□ 0.72
SPTBN4Q9H254 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.52■□□□□ 0.72
SPTBN4Q9H254 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.52■□□□□ 0.72
SPTBN4Q9H254 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.52■□□□□ 0.72
SPTBN4Q9H254 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SPTBN4Q9H254 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPTBN4Q9H254 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SPTBN4Q9H254 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.52■□□□□ 0.71
SPTBN4Q9H254 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SPTBN4Q9H254 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SPTBN4Q9H254 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.52■□□□□ 0.71
SPTBN4Q9H254 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SPTBN4Q9H254 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPTBN4Q9H254 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.5■□□□□ 0.71
SPTBN4Q9H254 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPTBN4Q9H254 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms