Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 DPP3P2-201ENST00000416030 1696 ntBASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
KRTAP3-1Q9BYR8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 BX119927.1-201ENST00000636596 1552 ntBASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 KRT16P2-201ENST00000414673 1423 ntBASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 AC245052.3-201ENST00000450182 901 ntBASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 AC027682.1-201ENST00000562846 899 ntBASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 GRAMD4P4-201ENST00000613563 1115 ntBASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
KRTAP3-1Q9BYR8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 PWWP2AP1-201ENST00000429776 2273 ntBASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 AP001330.3-201ENST00000520123 633 ntBASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 AC132872.1-201ENST00000566986 1195 ntBASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 AC138907.5-202ENST00000569484 235 ntBASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC10.25□□□□□ -0.77
KRTAP3-1Q9BYR8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms