Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 FAAHP1-202ENST00000446499 1238 ntBASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 HOMER2P1-201ENST00000455653 964 ntBASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 AL031985.4-201ENST00000642138 673 ntBASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
LRFN3Q9BTN0 AC124283.5-201ENST00000624661 1809 ntBASIC20.43■□□□□ 0.86
LRFN3Q9BTN0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRFN3Q9BTN0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRFN3Q9BTN0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRFN3Q9BTN0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
LRFN3Q9BTN0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRFN3Q9BTN0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRFN3Q9BTN0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.43■□□□□ 0.86
LRFN3Q9BTN0 ATP5G2P1-201ENST00000433580 426 ntBASIC20.43■□□□□ 0.86
LRFN3Q9BTN0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRFN3Q9BTN0 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.43■□□□□ 0.86
LRFN3Q9BTN0 AC111152.3-201ENST00000569699 673 ntBASIC20.43■□□□□ 0.86
LRFN3Q9BTN0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.43■□□□□ 0.86
LRFN3Q9BTN0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.43■□□□□ 0.86
LRFN3Q9BTN0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRFN3Q9BTN0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRFN3Q9BTN0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.43■□□□□ 0.86
LRFN3Q9BTN0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRFN3Q9BTN0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRFN3Q9BTN0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRFN3Q9BTN0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRFN3Q9BTN0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LRFN3Q9BTN0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRFN3Q9BTN0 AC003102.1-202ENST00000563394 1796 ntBASIC20.42■□□□□ 0.86
LRFN3Q9BTN0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
LRFN3Q9BTN0 CKBP1-201ENST00000565489 1086 ntBASIC20.42■□□□□ 0.86
LRFN3Q9BTN0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.42■□□□□ 0.86
LRFN3Q9BTN0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.42■□□□□ 0.86
LRFN3Q9BTN0 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.42■□□□□ 0.86
LRFN3Q9BTN0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRFN3Q9BTN0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.42■□□□□ 0.86
LRFN3Q9BTN0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRFN3Q9BTN0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 AL359075.1-203ENST00000462729 1002 ntBASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 AC097488.1-201ENST00000507834 756 ntBASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 DGCR10-201ENST00000609839 495 ntBASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 C11orf96-202ENST00000528572 1834 ntBASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRFN3Q9BTN0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRFN3Q9BTN0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRFN3Q9BTN0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRFN3Q9BTN0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRFN3Q9BTN0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRFN3Q9BTN0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.4■□□□□ 0.86
LRFN3Q9BTN0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.4■□□□□ 0.86
LRFN3Q9BTN0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRFN3Q9BTN0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRFN3Q9BTN0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.4■□□□□ 0.86
LRFN3Q9BTN0 PRELID1P1-202ENST00000567272 903 ntBASIC20.4■□□□□ 0.86
LRFN3Q9BTN0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRFN3Q9BTN0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.4■□□□□ 0.86
LRFN3Q9BTN0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
LRFN3Q9BTN0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.39■□□□□ 0.86
LRFN3Q9BTN0 AC116050.2-201ENST00000612102 1779 ntBASIC20.39■□□□□ 0.86
LRFN3Q9BTN0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LRFN3Q9BTN0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.39■□□□□ 0.85
LRFN3Q9BTN0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRFN3Q9BTN0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.39■□□□□ 0.85
LRFN3Q9BTN0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.39■□□□□ 0.85
LRFN3Q9BTN0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
LRFN3Q9BTN0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms