Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EBF4Q9BQW3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EBF4Q9BQW3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
EBF4Q9BQW3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.73■□□□□ 0.75
EBF4Q9BQW3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.73■□□□□ 0.75
EBF4Q9BQW3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.73■□□□□ 0.75
EBF4Q9BQW3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
EBF4Q9BQW3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EBF4Q9BQW3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.72■□□□□ 0.75
EBF4Q9BQW3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EBF4Q9BQW3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.72■□□□□ 0.75
EBF4Q9BQW3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EBF4Q9BQW3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EBF4Q9BQW3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EBF4Q9BQW3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
EBF4Q9BQW3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.72■□□□□ 0.75
EBF4Q9BQW3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.72■□□□□ 0.75
EBF4Q9BQW3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EBF4Q9BQW3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.72■□□□□ 0.75
EBF4Q9BQW3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.72■□□□□ 0.75
EBF4Q9BQW3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EBF4Q9BQW3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
EBF4Q9BQW3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EBF4Q9BQW3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 POU5F1P4-201ENST00000413175 1085 ntBASIC19.71■□□□□ 0.75
EBF4Q9BQW3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 AC008175.2-201ENST00000612840 297 ntBASIC19.71■□□□□ 0.75
EBF4Q9BQW3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 TMEM179-206ENST00000616017 1645 ntBASIC19.71■□□□□ 0.75
EBF4Q9BQW3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 DPP3P2-201ENST00000416030 1696 ntBASIC19.71■□□□□ 0.75
EBF4Q9BQW3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.71■□□□□ 0.75
EBF4Q9BQW3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 TREX1-205ENST00000625293 1783 ntBASIC19.7■□□□□ 0.74
EBF4Q9BQW3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 AC135279.3-201ENST00000610945 1311 ntBASIC19.7■□□□□ 0.74
EBF4Q9BQW3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.7■□□□□ 0.74
EBF4Q9BQW3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 MIR572-201ENST00000384983 95 ntBASIC19.69■□□□□ 0.74
EBF4Q9BQW3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 AC116050.2-201ENST00000612102 1779 ntBASIC19.69■□□□□ 0.74
EBF4Q9BQW3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
EBF4Q9BQW3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms