Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.28■□□□□ 0.04
AP1S3Q96PC3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S3Q96PC3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S3Q96PC3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S3Q96PC3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S3Q96PC3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S3Q96PC3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S3Q96PC3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S3Q96PC3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S3Q96PC3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
AP1S3Q96PC3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.27■□□□□ 0.04
AP1S3Q96PC3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
AP1S3Q96PC3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
AP1S3Q96PC3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
AP1S3Q96PC3 AC009299.2-201ENST00000482477 511 ntBASIC15.27■□□□□ 0.04
AP1S3Q96PC3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.27■□□□□ 0.04
AP1S3Q96PC3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP1S3Q96PC3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
AP1S3Q96PC3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP1S3Q96PC3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
AP1S3Q96PC3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.27■□□□□ 0.03
AP1S3Q96PC3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
AP1S3Q96PC3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.27■□□□□ 0.03
AP1S3Q96PC3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 KRT16P3-201ENST00000439127 1283 ntBASIC15.26■□□□□ 0.03
AP1S3Q96PC3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 UNC93B8-201ENST00000511903 705 ntBASIC15.26■□□□□ 0.03
AP1S3Q96PC3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
AP1S3Q96PC3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 SRD5A1P1-201ENST00000442297 786 ntBASIC15.25■□□□□ 0.03
AP1S3Q96PC3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 AC006128.1-201ENST00000624704 1661 ntBASIC15.25■□□□□ 0.03
AP1S3Q96PC3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 GABARAPL3-202ENST00000624044 1851 ntBASIC15.25■□□□□ 0.03
AP1S3Q96PC3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.25■□□□□ 0.03
AP1S3Q96PC3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.24■□□□□ 0.03
AP1S3Q96PC3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AP1S3Q96PC3 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms