Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.1■□□□□ 0.97
NECTIN4Q96NY8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NECTIN4Q96NY8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NECTIN4Q96NY8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NECTIN4Q96NY8 CLDN5-201ENST00000403084 2357 ntBASIC21.09■□□□□ 0.97
NECTIN4Q96NY8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.09■□□□□ 0.97
NECTIN4Q96NY8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
NECTIN4Q96NY8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.09■□□□□ 0.97
NECTIN4Q96NY8 AC005521.1-201ENST00000393351 872 ntBASIC21.09■□□□□ 0.97
NECTIN4Q96NY8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.09■□□□□ 0.97
NECTIN4Q96NY8 AP002982.1-201ENST00000492365 877 ntBASIC21.09■□□□□ 0.97
NECTIN4Q96NY8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.09■□□□□ 0.97
NECTIN4Q96NY8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NECTIN4Q96NY8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.09■□□□□ 0.97
NECTIN4Q96NY8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NECTIN4Q96NY8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.09■□□□□ 0.97
NECTIN4Q96NY8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NECTIN4Q96NY8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
NECTIN4Q96NY8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
NECTIN4Q96NY8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
NECTIN4Q96NY8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NECTIN4Q96NY8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
NECTIN4Q96NY8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NECTIN4Q96NY8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.08■□□□□ 0.97
NECTIN4Q96NY8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.08■□□□□ 0.97
NECTIN4Q96NY8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.08■□□□□ 0.97
NECTIN4Q96NY8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.08■□□□□ 0.97
NECTIN4Q96NY8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.08■□□□□ 0.97
NECTIN4Q96NY8 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.08■□□□□ 0.97
NECTIN4Q96NY8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NECTIN4Q96NY8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.08■□□□□ 0.97
NECTIN4Q96NY8 AL031963.3-201ENST00000606441 850 ntBASIC21.08■□□□□ 0.97
NECTIN4Q96NY8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.08■□□□□ 0.97
NECTIN4Q96NY8 LINC01568-207ENST00000641790 1380 ntBASIC21.08■□□□□ 0.96
NECTIN4Q96NY8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NECTIN4Q96NY8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NECTIN4Q96NY8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
NECTIN4Q96NY8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NECTIN4Q96NY8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NECTIN4Q96NY8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NECTIN4Q96NY8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.07■□□□□ 0.96
NECTIN4Q96NY8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.07■□□□□ 0.96
NECTIN4Q96NY8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NECTIN4Q96NY8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.07■□□□□ 0.96
NECTIN4Q96NY8 REXO1L10P-201ENST00000615707 1290 ntBASIC21.07■□□□□ 0.96
NECTIN4Q96NY8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NECTIN4Q96NY8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.07■□□□□ 0.96
NECTIN4Q96NY8 AC079598.2-202ENST00000546624 1451 ntBASIC21.07■□□□□ 0.96
NECTIN4Q96NY8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 AP000525.1-201ENST00000608286 694 ntBASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NECTIN4Q96NY8 KRT18P22-201ENST00000402024 1347 ntBASIC21.05■□□□□ 0.96
NECTIN4Q96NY8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.05■□□□□ 0.96
NECTIN4Q96NY8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NECTIN4Q96NY8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.05■□□□□ 0.96
NECTIN4Q96NY8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NECTIN4Q96NY8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NECTIN4Q96NY8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.05■□□□□ 0.96
NECTIN4Q96NY8 MIR1238-201ENST00000408483 83 ntBASIC21.05■□□□□ 0.96
NECTIN4Q96NY8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.05■□□□□ 0.96
NECTIN4Q96NY8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.05■□□□□ 0.96
NECTIN4Q96NY8 NAPSB-206ENST00000562112 1266 ntBASIC21.05■□□□□ 0.96
NECTIN4Q96NY8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NECTIN4Q96NY8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
NECTIN4Q96NY8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
NECTIN4Q96NY8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NECTIN4Q96NY8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NECTIN4Q96NY8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN4Q96NY8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN4Q96NY8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NECTIN4Q96NY8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN4Q96NY8 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN4Q96NY8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.04■□□□□ 0.96
NECTIN4Q96NY8 AL137013.1-201ENST00000432946 1228 ntBASIC21.04■□□□□ 0.96
NECTIN4Q96NY8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.04■□□□□ 0.96
NECTIN4Q96NY8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NECTIN4Q96NY8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN4Q96NY8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NECTIN4Q96NY8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.04■□□□□ 0.96
NECTIN4Q96NY8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms