Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IFT43Q96FT9 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.8■□□□□ 0.92
IFT43Q96FT9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IFT43Q96FT9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
IFT43Q96FT9 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
IFT43Q96FT9 AL512625.2-201ENST00000417533 625 ntBASIC20.8■□□□□ 0.92
IFT43Q96FT9 CYP2T1P-201ENST00000432607 1285 ntBASIC20.8■□□□□ 0.92
IFT43Q96FT9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.8■□□□□ 0.92
IFT43Q96FT9 AL162412.1-201ENST00000567129 965 ntBASIC20.8■□□□□ 0.92
IFT43Q96FT9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
IFT43Q96FT9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
IFT43Q96FT9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
IFT43Q96FT9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
IFT43Q96FT9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IFT43Q96FT9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IFT43Q96FT9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
IFT43Q96FT9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
IFT43Q96FT9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
IFT43Q96FT9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IFT43Q96FT9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
IFT43Q96FT9 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
IFT43Q96FT9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IFT43Q96FT9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IFT43Q96FT9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IFT43Q96FT9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.79■□□□□ 0.92
IFT43Q96FT9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
IFT43Q96FT9 MIR4758-201ENST00000577688 71 ntBASIC20.79■□□□□ 0.92
IFT43Q96FT9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.79■□□□□ 0.92
IFT43Q96FT9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
IFT43Q96FT9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.79■□□□□ 0.92
IFT43Q96FT9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
IFT43Q96FT9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.79■□□□□ 0.92
IFT43Q96FT9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IFT43Q96FT9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
IFT43Q96FT9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
IFT43Q96FT9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IFT43Q96FT9 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
IFT43Q96FT9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.78■□□□□ 0.92
IFT43Q96FT9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.78■□□□□ 0.92
IFT43Q96FT9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFT43Q96FT9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
IFT43Q96FT9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFT43Q96FT9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.78■□□□□ 0.92
IFT43Q96FT9 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFT43Q96FT9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.78■□□□□ 0.92
IFT43Q96FT9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
IFT43Q96FT9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
IFT43Q96FT9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
IFT43Q96FT9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
IFT43Q96FT9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.78■□□□□ 0.92
IFT43Q96FT9 AC069236.1-201ENST00000604339 616 ntBASIC20.78■□□□□ 0.92
IFT43Q96FT9 AC008694.1-202ENST00000636953 945 ntBASIC20.78■□□□□ 0.92
IFT43Q96FT9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.78■□□□□ 0.92
IFT43Q96FT9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFT43Q96FT9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFT43Q96FT9 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFT43Q96FT9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IFT43Q96FT9 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.78■□□□□ 0.92
IFT43Q96FT9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
IFT43Q96FT9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IFT43Q96FT9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
IFT43Q96FT9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.77■□□□□ 0.92
IFT43Q96FT9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
IFT43Q96FT9 TMEM191A-211ENST00000637163 1067 ntBASIC20.77■□□□□ 0.92
IFT43Q96FT9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
IFT43Q96FT9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.77■□□□□ 0.92
IFT43Q96FT9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
IFT43Q96FT9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
IFT43Q96FT9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.77■□□□□ 0.91
IFT43Q96FT9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.77■□□□□ 0.91
IFT43Q96FT9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
IFT43Q96FT9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
IFT43Q96FT9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFT43Q96FT9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFT43Q96FT9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFT43Q96FT9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFT43Q96FT9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFT43Q96FT9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.76■□□□□ 0.91
IFT43Q96FT9 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.76■□□□□ 0.91
IFT43Q96FT9 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
IFT43Q96FT9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFT43Q96FT9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.76■□□□□ 0.91
IFT43Q96FT9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IFT43Q96FT9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFT43Q96FT9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.76■□□□□ 0.91
IFT43Q96FT9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IFT43Q96FT9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
IFT43Q96FT9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.76■□□□□ 0.91
IFT43Q96FT9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IFT43Q96FT9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFT43Q96FT9 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.75■□□□□ 0.91
IFT43Q96FT9 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.75■□□□□ 0.91
IFT43Q96FT9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFT43Q96FT9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFT43Q96FT9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFT43Q96FT9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFT43Q96FT9 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
IFT43Q96FT9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
IFT43Q96FT9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
IFT43Q96FT9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms