Protein–RNA interactions for Protein: Q8WWF5

ZNRF4, E3 ubiquitin-protein ligase ZNRF4, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF4Q8WWF5 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNRF4Q8WWF5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNRF4Q8WWF5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNRF4Q8WWF5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
ZNRF4Q8WWF5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.06■□□□□ 0.48
ZNRF4Q8WWF5 DPP3P2-201ENST00000416030 1696 ntBASIC18.06■□□□□ 0.48
ZNRF4Q8WWF5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNRF4Q8WWF5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNRF4Q8WWF5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNRF4Q8WWF5 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.05■□□□□ 0.48
ZNRF4Q8WWF5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNRF4Q8WWF5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNRF4Q8WWF5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ZNRF4Q8WWF5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
ZNRF4Q8WWF5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNRF4Q8WWF5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNRF4Q8WWF5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNRF4Q8WWF5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNRF4Q8WWF5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNRF4Q8WWF5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
ZNRF4Q8WWF5 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNRF4Q8WWF5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
ZNRF4Q8WWF5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNRF4Q8WWF5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNRF4Q8WWF5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNRF4Q8WWF5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNRF4Q8WWF5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNRF4Q8WWF5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNRF4Q8WWF5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 AL158211.5-201ENST00000623583 2518 ntBASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 AL691432.2-201ENST00000607222 2038 ntBASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNRF4Q8WWF5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNRF4Q8WWF5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ZNRF4Q8WWF5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
ZNRF4Q8WWF5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZNRF4Q8WWF5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.02■□□□□ 0.48
ZNRF4Q8WWF5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNRF4Q8WWF5 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ZNRF4Q8WWF5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNRF4Q8WWF5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.02■□□□□ 0.48
ZNRF4Q8WWF5 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.02■□□□□ 0.48
ZNRF4Q8WWF5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ZNRF4Q8WWF5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.02■□□□□ 0.48
ZNRF4Q8WWF5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ZNRF4Q8WWF5 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.02■□□□□ 0.48
ZNRF4Q8WWF5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ZNRF4Q8WWF5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ZNRF4Q8WWF5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ZNRF4Q8WWF5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ZNRF4Q8WWF5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.02■□□□□ 0.47
ZNRF4Q8WWF5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.01■□□□□ 0.47
ZNRF4Q8WWF5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ZNRF4Q8WWF5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms