Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CCDC33Q8N5R6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC33Q8N5R6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC33Q8N5R6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC33Q8N5R6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC33Q8N5R6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC33Q8N5R6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC33Q8N5R6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC33Q8N5R6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC33Q8N5R6 AL355472.2-201ENST00000422958 438 ntBASIC21.23■□□□□ 0.99
CCDC33Q8N5R6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC33Q8N5R6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CCDC33Q8N5R6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC33Q8N5R6 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC33Q8N5R6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC33Q8N5R6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC33Q8N5R6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC33Q8N5R6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC33Q8N5R6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC33Q8N5R6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC33Q8N5R6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC33Q8N5R6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.22■□□□□ 0.99
CCDC33Q8N5R6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.22■□□□□ 0.99
CCDC33Q8N5R6 AC098590.1-201ENST00000468126 897 ntBASIC21.22■□□□□ 0.99
CCDC33Q8N5R6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.22■□□□□ 0.99
CCDC33Q8N5R6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.22■□□□□ 0.99
CCDC33Q8N5R6 AC006058.3-201ENST00000606217 1069 ntBASIC21.22■□□□□ 0.99
CCDC33Q8N5R6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC33Q8N5R6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC33Q8N5R6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC33Q8N5R6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC33Q8N5R6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC33Q8N5R6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC33Q8N5R6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC33Q8N5R6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC33Q8N5R6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCDC33Q8N5R6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC33Q8N5R6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCDC33Q8N5R6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC33Q8N5R6 AC011484.1-201ENST00000377652 1995 ntBASIC21.21■□□□□ 0.99
CCDC33Q8N5R6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC33Q8N5R6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCDC33Q8N5R6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
CCDC33Q8N5R6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC33Q8N5R6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC33Q8N5R6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC33Q8N5R6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC33Q8N5R6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC33Q8N5R6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC33Q8N5R6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC33Q8N5R6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC33Q8N5R6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC33Q8N5R6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC33Q8N5R6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC33Q8N5R6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CCDC33Q8N5R6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CCDC33Q8N5R6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 AC073314.1-201ENST00000568729 2216 ntBASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 AC091799.1-201ENST00000422823 811 ntBASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC33Q8N5R6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 FEM1AP1-201ENST00000431297 1995 ntBASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 AL158047.1-201ENST00000445918 881 ntBASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC33Q8N5R6 KRT17P1-201ENST00000399211 1546 ntBASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms