Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 CCDC92B-201ENST00000575506 885 ntBASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC01561Q8N1V8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01561Q8N1V8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01561Q8N1V8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01561Q8N1V8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LINC01561Q8N1V8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC13.58□□□□□ -0.23
LINC01561Q8N1V8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC13.58□□□□□ -0.23
LINC01561Q8N1V8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC13.58□□□□□ -0.23
LINC01561Q8N1V8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 AC007322.3-201ENST00000426526 701 ntBASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 AC096631.2-201ENST00000436136 790 ntBASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 AF213884.3-201ENST00000563833 479 ntBASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC01561Q8N1V8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 PGM5P4-201ENST00000421970 445 ntBASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 SLC7A5P1-201ENST00000568957 537 ntBASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 AL136967.2-201ENST00000623968 743 ntBASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC01561Q8N1V8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 AC087289.5-201ENST00000586076 3175 ntBASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 IRS3P-201ENST00000223076 1006 ntBASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 AC112907.3-201ENST00000577781 2400 ntBASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 BX119927.1-201ENST00000636596 1552 ntBASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LINC01561Q8N1V8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms