Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00528Q8N1L1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00528Q8N1L1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00528Q8N1L1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LINC00528Q8N1L1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00528Q8N1L1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00528Q8N1L1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00528Q8N1L1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00528Q8N1L1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00528Q8N1L1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00528Q8N1L1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 MIPEPP3-201ENST00000412105 444 ntBASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 AC120498.10-201ENST00000621827 505 ntBASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 AC068338.2-201ENST00000563278 1430 ntBASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LINC00528Q8N1L1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 SLC7A5P1-201ENST00000568957 537 ntBASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 AC008687.6-201ENST00000596318 630 ntBASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 AL137246.1-201ENST00000607072 977 ntBASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 AC048344.4-201ENST00000619744 527 ntBASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 ITM2C-210ENST00000620962 501 ntBASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 OR10C1-204ENST00000622521 1039 ntBASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00528Q8N1L1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
LINC00528Q8N1L1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00528Q8N1L1 GABARAPL3-202ENST00000624044 1851 ntBASIC13.27□□□□□ -0.28
LINC00528Q8N1L1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
LINC00528Q8N1L1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00528Q8N1L1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00528Q8N1L1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00528Q8N1L1 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC13.27□□□□□ -0.28
LINC00528Q8N1L1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00528Q8N1L1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms