Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
XRN1Q8IZH2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC28.41■■■□□ 2.14
XRN1Q8IZH2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
XRN1Q8IZH2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC28.41■■■□□ 2.14
XRN1Q8IZH2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC28.41■■■□□ 2.14
XRN1Q8IZH2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
XRN1Q8IZH2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
XRN1Q8IZH2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC28.41■■■□□ 2.14
XRN1Q8IZH2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
XRN1Q8IZH2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC28.4■■■□□ 2.14
XRN1Q8IZH2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
XRN1Q8IZH2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
XRN1Q8IZH2 KRT16P1-201ENST00000399124 1418 ntBASIC28.4■■■□□ 2.14
XRN1Q8IZH2 DUX4L26-201ENST00000489078 1255 ntBASIC28.4■■■□□ 2.14
XRN1Q8IZH2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC28.4■■■□□ 2.14
XRN1Q8IZH2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC28.4■■■□□ 2.14
XRN1Q8IZH2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
XRN1Q8IZH2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC28.4■■■□□ 2.14
XRN1Q8IZH2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC28.4■■■□□ 2.14
XRN1Q8IZH2 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC28.4■■■□□ 2.14
XRN1Q8IZH2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
XRN1Q8IZH2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
XRN1Q8IZH2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
XRN1Q8IZH2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC28.39■■■□□ 2.14
XRN1Q8IZH2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC28.39■■■□□ 2.14
XRN1Q8IZH2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
XRN1Q8IZH2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
XRN1Q8IZH2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
XRN1Q8IZH2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
XRN1Q8IZH2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC28.39■■■□□ 2.14
XRN1Q8IZH2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC28.39■■■□□ 2.13
XRN1Q8IZH2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
XRN1Q8IZH2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC28.38■■■□□ 2.13
XRN1Q8IZH2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC28.38■■■□□ 2.13
XRN1Q8IZH2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
XRN1Q8IZH2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
XRN1Q8IZH2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
XRN1Q8IZH2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
XRN1Q8IZH2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
XRN1Q8IZH2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC28.38■■■□□ 2.13
XRN1Q8IZH2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC28.38■■■□□ 2.13
XRN1Q8IZH2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC28.38■■■□□ 2.13
XRN1Q8IZH2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC28.38■■■□□ 2.13
XRN1Q8IZH2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
XRN1Q8IZH2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
XRN1Q8IZH2 PTBP1P-201ENST00000554374 1601 ntBASIC28.37■■■□□ 2.13
XRN1Q8IZH2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
XRN1Q8IZH2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC28.37■■■□□ 2.13
XRN1Q8IZH2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
XRN1Q8IZH2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
XRN1Q8IZH2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
XRN1Q8IZH2 PNN-205ENST00000556530 601 ntTSL 2 BASIC28.37■■■□□ 2.13
XRN1Q8IZH2 NAPSB-206ENST00000562112 1266 ntBASIC28.37■■■□□ 2.13
XRN1Q8IZH2 AC006011.2-201ENST00000621313 1158 ntBASIC28.37■■■□□ 2.13
XRN1Q8IZH2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC28.36■■■□□ 2.13
XRN1Q8IZH2 AP002982.1-201ENST00000492365 877 ntBASIC28.36■■■□□ 2.13
XRN1Q8IZH2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC28.36■■■□□ 2.13
XRN1Q8IZH2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC28.36■■■□□ 2.13
XRN1Q8IZH2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC28.36■■■□□ 2.13
XRN1Q8IZH2 MIR2861-201ENST00000636310 90 ntBASIC28.36■■■□□ 2.13
XRN1Q8IZH2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
XRN1Q8IZH2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
XRN1Q8IZH2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
XRN1Q8IZH2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC28.36■■■□□ 2.13
XRN1Q8IZH2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
XRN1Q8IZH2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
XRN1Q8IZH2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
XRN1Q8IZH2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
XRN1Q8IZH2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
XRN1Q8IZH2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC28.35■■■□□ 2.13
XRN1Q8IZH2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
XRN1Q8IZH2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC28.35■■■□□ 2.13
XRN1Q8IZH2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC28.35■■■□□ 2.13
XRN1Q8IZH2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
XRN1Q8IZH2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
XRN1Q8IZH2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
XRN1Q8IZH2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
XRN1Q8IZH2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
XRN1Q8IZH2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC28.35■■■□□ 2.13
XRN1Q8IZH2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC28.35■■■□□ 2.13
XRN1Q8IZH2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
XRN1Q8IZH2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
XRN1Q8IZH2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
XRN1Q8IZH2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC28.34■■■□□ 2.13
XRN1Q8IZH2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
XRN1Q8IZH2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
XRN1Q8IZH2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
XRN1Q8IZH2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC28.34■■■□□ 2.13
XRN1Q8IZH2 KSR1P1-201ENST00000446298 240 ntBASIC28.34■■■□□ 2.13
XRN1Q8IZH2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC28.34■■■□□ 2.13
XRN1Q8IZH2 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
XRN1Q8IZH2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
XRN1Q8IZH2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
XRN1Q8IZH2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC28.34■■■□□ 2.13
XRN1Q8IZH2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC28.34■■■□□ 2.13
XRN1Q8IZH2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC28.34■■■□□ 2.13
XRN1Q8IZH2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
XRN1Q8IZH2 GOLGA2P6-201ENST00000340929 2049 ntBASIC28.33■■■□□ 2.13
XRN1Q8IZH2 KRT8P36-201ENST00000489121 1440 ntBASIC28.33■■■□□ 2.13
XRN1Q8IZH2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms