Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.36■□□□□ 0.69
PPP4R4Q6NUP7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
PPP4R4Q6NUP7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
PPP4R4Q6NUP7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PPP4R4Q6NUP7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
PPP4R4Q6NUP7 BX005040.4-201ENST00000637145 1518 ntBASIC19.35■□□□□ 0.69
PPP4R4Q6NUP7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R4Q6NUP7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
PPP4R4Q6NUP7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.35■□□□□ 0.69
PPP4R4Q6NUP7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
PPP4R4Q6NUP7 LINC02228-203ENST00000641970 1355 ntBASIC19.35■□□□□ 0.69
PPP4R4Q6NUP7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.35■□□□□ 0.69
PPP4R4Q6NUP7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R4Q6NUP7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.35■□□□□ 0.69
PPP4R4Q6NUP7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.35■□□□□ 0.69
PPP4R4Q6NUP7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PPP4R4Q6NUP7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.35■□□□□ 0.69
PPP4R4Q6NUP7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.35■□□□□ 0.69
PPP4R4Q6NUP7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R4Q6NUP7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R4Q6NUP7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PPP4R4Q6NUP7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PPP4R4Q6NUP7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PPP4R4Q6NUP7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.69
PPP4R4Q6NUP7 AP004607.7-201ENST00000527152 1677 ntBASIC19.33■□□□□ 0.69
PPP4R4Q6NUP7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.33■□□□□ 0.69
PPP4R4Q6NUP7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PPP4R4Q6NUP7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PPP4R4Q6NUP7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PPP4R4Q6NUP7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.33■□□□□ 0.69
PPP4R4Q6NUP7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PPP4R4Q6NUP7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.33■□□□□ 0.69
PPP4R4Q6NUP7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PPP4R4Q6NUP7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PPP4R4Q6NUP7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.33■□□□□ 0.68
PPP4R4Q6NUP7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.33■□□□□ 0.68
PPP4R4Q6NUP7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
PPP4R4Q6NUP7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PPP4R4Q6NUP7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PPP4R4Q6NUP7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.33■□□□□ 0.68
PPP4R4Q6NUP7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.33■□□□□ 0.68
PPP4R4Q6NUP7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.32■□□□□ 0.68
PPP4R4Q6NUP7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R4Q6NUP7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PPP4R4Q6NUP7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R4Q6NUP7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R4Q6NUP7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PPP4R4Q6NUP7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PPP4R4Q6NUP7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R4Q6NUP7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PPP4R4Q6NUP7 AC034268.1-201ENST00000441047 882 ntBASIC19.32■□□□□ 0.68
PPP4R4Q6NUP7 CCDC92B-201ENST00000575506 885 ntBASIC19.32■□□□□ 0.68
PPP4R4Q6NUP7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.32■□□□□ 0.68
PPP4R4Q6NUP7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R4Q6NUP7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R4Q6NUP7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R4Q6NUP7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R4Q6NUP7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R4Q6NUP7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.32■□□□□ 0.68
PPP4R4Q6NUP7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PPP4R4Q6NUP7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R4Q6NUP7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.31■□□□□ 0.68
PPP4R4Q6NUP7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R4Q6NUP7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R4Q6NUP7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PPP4R4Q6NUP7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PPP4R4Q6NUP7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R4Q6NUP7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R4Q6NUP7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
PPP4R4Q6NUP7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R4Q6NUP7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R4Q6NUP7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R4Q6NUP7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R4Q6NUP7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.31■□□□□ 0.68
PPP4R4Q6NUP7 AC123595.1-201ENST00000440769 1046 ntBASIC19.31■□□□□ 0.68
PPP4R4Q6NUP7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.31■□□□□ 0.68
PPP4R4Q6NUP7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP4R4Q6NUP7 KRT18P14-201ENST00000534205 1250 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms