Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4BQ5SQS7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4BQ5SQS7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.02■□□□□ 0.8
SH2D4BQ5SQS7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4BQ5SQS7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.02■□□□□ 0.8
SH2D4BQ5SQS7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4BQ5SQS7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4BQ5SQS7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4BQ5SQS7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4BQ5SQS7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.02■□□□□ 0.8
SH2D4BQ5SQS7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
SH2D4BQ5SQS7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4BQ5SQS7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH2D4BQ5SQS7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SH2D4BQ5SQS7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SH2D4BQ5SQS7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 AC092720.2-201ENST00000602388 1665 ntBASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 AC008175.2-201ENST00000612840 297 ntBASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.01■□□□□ 0.79
SH2D4BQ5SQS7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 TPRG1LP1-201ENST00000598702 760 ntBASIC20■□□□□ 0.79
SH2D4BQ5SQS7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20■□□□□ 0.79
SH2D4BQ5SQS7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.99■□□□□ 0.79
SH2D4BQ5SQS7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SH2D4BQ5SQS7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.99■□□□□ 0.79
SH2D4BQ5SQS7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH2D4BQ5SQS7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH2D4BQ5SQS7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
SH2D4BQ5SQS7 POU5F1P4-201ENST00000413175 1085 ntBASIC19.99■□□□□ 0.79
SH2D4BQ5SQS7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.99■□□□□ 0.79
SH2D4BQ5SQS7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.99■□□□□ 0.79
SH2D4BQ5SQS7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.99■□□□□ 0.79
SH2D4BQ5SQS7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.99■□□□□ 0.79
SH2D4BQ5SQS7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SH2D4BQ5SQS7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.99■□□□□ 0.79
SH2D4BQ5SQS7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.99■□□□□ 0.79
SH2D4BQ5SQS7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH2D4BQ5SQS7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SH2D4BQ5SQS7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH2D4BQ5SQS7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH2D4BQ5SQS7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH2D4BQ5SQS7 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.98■□□□□ 0.79
SH2D4BQ5SQS7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH2D4BQ5SQS7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH2D4BQ5SQS7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.98■□□□□ 0.79
SH2D4BQ5SQS7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
SH2D4BQ5SQS7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SH2D4BQ5SQS7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH2D4BQ5SQS7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH2D4BQ5SQS7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH2D4BQ5SQS7 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.98■□□□□ 0.79
SH2D4BQ5SQS7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SH2D4BQ5SQS7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SH2D4BQ5SQS7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH2D4BQ5SQS7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SH2D4BQ5SQS7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH2D4BQ5SQS7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SH2D4BQ5SQS7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SH2D4BQ5SQS7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SH2D4BQ5SQS7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms