Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ZNF140P52738 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF140P52738 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ZNF140P52738 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF140P52738 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF140P52738 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ZNF140P52738 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF140P52738 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF140P52738 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
ZNF140P52738 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF140P52738 AC073130.3-201ENST00000624389 2278 ntBASIC20.22■□□□□ 0.83
ZNF140P52738 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF140P52738 AC083906.2-201ENST00000511578 360 ntBASIC20.22■□□□□ 0.83
ZNF140P52738 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF140P52738 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF140P52738 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ZNF140P52738 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.22■□□□□ 0.83
ZNF140P52738 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF140P52738 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ZNF140P52738 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF140P52738 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF140P52738 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF140P52738 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF140P52738 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ZNF140P52738 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF140P52738 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ZNF140P52738 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF140P52738 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF140P52738 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF140P52738 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.21■□□□□ 0.83
ZNF140P52738 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.21■□□□□ 0.83
ZNF140P52738 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF140P52738 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF140P52738 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF140P52738 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.21■□□□□ 0.83
ZNF140P52738 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF140P52738 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.21■□□□□ 0.83
ZNF140P52738 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF140P52738 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF140P52738 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF140P52738 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF140P52738 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
ZNF140P52738 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF140P52738 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF140P52738 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF140P52738 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF140P52738 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF140P52738 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF140P52738 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF140P52738 AC090192.1-201ENST00000517740 490 ntBASIC20.2■□□□□ 0.82
ZNF140P52738 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.2■□□□□ 0.82
ZNF140P52738 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF140P52738 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF140P52738 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF140P52738 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF140P52738 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF140P52738 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF140P52738 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF140P52738 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF140P52738 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF140P52738 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF140P52738 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF140P52738 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF140P52738 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF140P52738 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF140P52738 BX276092.2-201ENST00000417668 665 ntBASIC20.19■□□□□ 0.82
ZNF140P52738 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
ZNF140P52738 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.19■□□□□ 0.82
ZNF140P52738 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
ZNF140P52738 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF140P52738 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF140P52738 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF140P52738 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF140P52738 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF140P52738 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
ZNF140P52738 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF140P52738 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF140P52738 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF140P52738 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF140P52738 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF140P52738 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
ZNF140P52738 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF140P52738 AC099778.1-201ENST00000568593 1911 ntBASIC20.18■□□□□ 0.82
ZNF140P52738 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF140P52738 PTBP1P-201ENST00000554374 1601 ntBASIC20.18■□□□□ 0.82
ZNF140P52738 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF140P52738 GPX1P1-201ENST00000388829 606 ntBASIC20.18■□□□□ 0.82
ZNF140P52738 LSM12P1-201ENST00000411836 588 ntBASIC20.18■□□□□ 0.82
ZNF140P52738 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.18■□□□□ 0.82
ZNF140P52738 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF140P52738 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ZNF140P52738 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ZNF140P52738 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF140P52738 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.18■□□□□ 0.82
ZNF140P52738 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF140P52738 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF140P52738 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF140P52738 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF140P52738 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF140P52738 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms