Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPL13AP40429 DYM-203ENST00000442713 2147 ntTSL 2 BASIC13.98□□□□□ -0.17
RPL13AP40429 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC13.98□□□□□ -0.17
RPL13AP40429 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPL13AP40429 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC13.98□□□□□ -0.17
RPL13AP40429 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RPL13AP40429 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPL13AP40429 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPL13AP40429 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPL13AP40429 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RPL13AP40429 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPL13AP40429 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPL13AP40429 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC13.98□□□□□ -0.17
RPL13AP40429 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPL13AP40429 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
RPL13AP40429 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPL13AP40429 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RPL13AP40429 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPL13AP40429 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPL13AP40429 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
RPL13AP40429 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC13.98□□□□□ -0.17
RPL13AP40429 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL13AP40429 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL13AP40429 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL13AP40429 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL13AP40429 AC098818.2-201ENST00000564925 2320 ntBASIC13.97□□□□□ -0.17
RPL13AP40429 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RPL13AP40429 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
RPL13AP40429 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.97□□□□□ -0.17
RPL13AP40429 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL13AP40429 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
RPL13AP40429 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL13AP40429 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL13AP40429 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
RPL13AP40429 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC13.97□□□□□ -0.17
RPL13AP40429 AC120024.1-201ENST00000562672 995 ntBASIC13.97□□□□□ -0.17
RPL13AP40429 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RPL13AP40429 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPL13AP40429 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL13AP40429 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL13AP40429 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
RPL13AP40429 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.97□□□□□ -0.17
RPL13AP40429 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL13AP40429 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL13AP40429 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL13AP40429 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPL13AP40429 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC13.97□□□□□ -0.17
RPL13AP40429 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL13AP40429 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL13AP40429 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPL13AP40429 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL13AP40429 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL13AP40429 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL13AP40429 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL13AP40429 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RPL13AP40429 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL13AP40429 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
RPL13AP40429 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC13.96□□□□□ -0.17
RPL13AP40429 BID-204ENST00000399767 2129 ntTSL 2 BASIC13.96□□□□□ -0.17
RPL13AP40429 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
RPL13AP40429 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC13.96□□□□□ -0.17
RPL13AP40429 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL13AP40429 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL13AP40429 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
RPL13AP40429 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC13.96□□□□□ -0.17
RPL13AP40429 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL13AP40429 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RPL13AP40429 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL13AP40429 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
RPL13AP40429 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC13.96□□□□□ -0.17
RPL13AP40429 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
RPL13AP40429 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL13AP40429 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL13AP40429 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC13.96□□□□□ -0.17
RPL13AP40429 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
RPL13AP40429 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC13.96□□□□□ -0.18
RPL13AP40429 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL13AP40429 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL13AP40429 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL13AP40429 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL13AP40429 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL13AP40429 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL13AP40429 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL13AP40429 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL13AP40429 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL13AP40429 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC13.96□□□□□ -0.18
RPL13AP40429 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL13AP40429 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.96□□□□□ -0.18
RPL13AP40429 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL13AP40429 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
RPL13AP40429 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC13.95□□□□□ -0.18
RPL13AP40429 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL13AP40429 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL13AP40429 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL13AP40429 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL13AP40429 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL13AP40429 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
RPL13AP40429 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
RPL13AP40429 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
RPL13AP40429 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms