Protein–RNA interactions for Protein: P38961

RRP8, 25S rRNA (adenine(645)-N(1))-methyltransferase, yeastyeast

Known RBP Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP8P38961 YPR146CYPR146C 330 nt2.57□□□□□ -2
RRP8P38961 CRM1YGR218W 3255 nt2.57□□□□□ -2
RRP8P38961 NAN1YPL126W 2691 nt2.56□□□□□ -2
RRP8P38961 SGD1YLR336C 2700 nt2.56□□□□□ -2
RRP8P38961 YER121WYER121W 345 nt2.56□□□□□ -2
RRP8P38961 NOP10YHR072W-A 177 nt2.56□□□□□ -2
RRP8P38961 RPS18BYML026C 441 nt2.56□□□□□ -2
RRP8P38961 ISF1YMR081C 1017 nt2.56□□□□□ -2
RRP8P38961 SNC2YOR327C 348 nt2.56□□□□□ -2
RRP8P38961 YBR121C-AYBR121C-A 159 nt2.56□□□□□ -2
RRP8P38961 UBP15YMR304W 3693 nt2.55□□□□□ -2
RRP8P38961 GCN4YEL009C 846 nt2.55□□□□□ -2
RRP8P38961 STH1YIL126W 4080 nt2.55□□□□□ -2
RRP8P38961 RIC1YLR039C 3171 nt2.55□□□□□ -2
RRP8P38961 PGA1YNL158W 597 nt2.55□□□□□ -2
RRP8P38961 YIL115W-AYIL115W-A 372 nt2.54□□□□□ -2
RRP8P38961 PAU8YAL068C 363 nt2.54□□□□□ -2
RRP8P38961 YBL073WYBL073W 312 nt2.54□□□□□ -2
RRP8P38961 HCH1YNL281W 462 nt2.54□□□□□ -2
RRP8P38961 PAU20YOL161C 363 nt2.54□□□□□ -2
RRP8P38961 GIP3YPL137C 3831 nt2.54□□□□□ -2
RRP8P38961 UBR1YGR184C 5853 nt2.54□□□□□ -2
RRP8P38961 NUP120YKL057C 3114 nt2.54□□□□□ -2
RRP8P38961 PCF11YDR228C 1881 nt2.54□□□□□ -2
RRP8P38961 UTP22YGR090W 3714 nt2.54□□□□□ -2
RRP8P38961 TFC3YAL001C 3483 nt2.54□□□□□ -2
RRP8P38961 SPF1YEL031W 3648 nt2.53□□□□□ -2
RRP8P38961 YFL032WYFL032W 321 nt2.53□□□□□ -2
RRP8P38961 SMD1YGR074W 441 nt2.53□□□□□ -2
RRP8P38961 MAM33YIL070C 801 nt2.53□□□□□ -2
RRP8P38961 RPL9BYNL067W 576 nt2.53□□□□□ -2
RRP8P38961 RAV1YJR033C 4074 nt2.53□□□□□ -2
RRP8P38961 MLH1YMR167W 2310 nt2.53□□□□□ -2
RRP8P38961 VPS13YLL040C 9435 nt2.52□□□□□ -2.01
RRP8P38961 YDL011CYDL011C 324 nt2.52□□□□□ -2.01
RRP8P38961 YGL024WYGL024W 336 nt2.52□□□□□ -2.01
RRP8P38961 UTP30YKR060W 825 nt2.52□□□□□ -2.01
RRP8P38961 FCF2YLR051C 654 nt2.52□□□□□ -2.01
RRP8P38961 YMR031W-AYMR031W-A 327 nt2.52□□□□□ -2.01
RRP8P38961 IRC23YOR044W 474 nt2.52□□□□□ -2.01
RRP8P38961 YPR097WYPR097W 3222 nt2.52□□□□□ -2.01
RRP8P38961 YER079C-AYER079C-A 339 nt2.51□□□□□ -2.01
RRP8P38961 RPS17AYML024W 411 nt2.51□□□□□ -2.01
RRP8P38961 YMR194C-AYMR194C-A 225 nt2.51□□□□□ -2.01
RRP8P38961 KTI11YBL071W-A 249 nt2.51□□□□□ -2.01
RRP8P38961 BIL1YOR304C-A 231 nt2.51□□□□□ -2.01
RRP8P38961 SSD1YDR293C 3753 nt2.51□□□□□ -2.01
RRP8P38961 KOG1YHR186C 4674 nt2.51□□□□□ -2.01
RRP8P38961 QCR7YDR529C 384 nt2.5□□□□□ -2.01
RRP8P38961 PEX4YGR133W 552 nt2.5□□□□□ -2.01
RRP8P38961 YCL023CYCL023C 348 nt2.5□□□□□ -2.01
RRP8P38961 ALK2YBL009W 2031 nt2.5□□□□□ -2.01
RRP8P38961 SEC16YPL085W 6588 nt2.5□□□□□ -2.01
RRP8P38961 VPH1YOR270C 2523 nt2.5□□□□□ -2.01
RRP8P38961 SMY1YKL079W 1971 nt2.5□□□□□ -2.01
RRP8P38961 MNL2YLR057W 2550 nt2.49□□□□□ -2.01
RRP8P38961 DAD4YDR320C-A 219 nt2.49□□□□□ -2.01
RRP8P38961 PUT3YKL015W 2940 nt2.49□□□□□ -2.01
RRP8P38961 CDC53YDL132W 2448 nt2.49□□□□□ -2.01
RRP8P38961 DOT6YER088C 2013 nt2.48□□□□□ -2.01
RRP8P38961 BRP1YGL007W 378 nt2.48□□□□□ -2.01
RRP8P38961 YJL052C-AYJL052C-A 120 nt2.48□□□□□ -2.01
RRP8P38961 snR36snR36 182 nt2.48□□□□□ -2.01
RRP8P38961 SSQ1YLR369W 1974 nt2.48□□□□□ -2.01
RRP8P38961 VPS35YJL154C 2835 nt2.48□□□□□ -2.01
RRP8P38961 DNF1YER166W 4716 nt2.48□□□□□ -2.01
RRP8P38961 YBP1YBR216C 2025 nt2.47□□□□□ -2.01
RRP8P38961 CDC60YPL160W 3273 nt2.47□□□□□ -2.01
RRP8P38961 TOR2YKL203C 7425 nt2.47□□□□□ -2.01
RRP8P38961 VMR1YHL035C 4779 nt2.46□□□□□ -2.02
RRP8P38961 PET309YLR067C 2898 nt2.46□□□□□ -2.02
RRP8P38961 CDC27YBL084C 2277 nt2.46□□□□□ -2.02
RRP8P38961 YCR022CYCR022C 345 nt2.46□□□□□ -2.02
RRP8P38961 YDR008CYDR008C 351 nt2.46□□□□□ -2.02
RRP8P38961 YIL066W-AYIL066W-A 444 nt2.46□□□□□ -2.02
RRP8P38961 YKL165C-AYKL165C-A 234 nt2.46□□□□□ -2.02
RRP8P38961 YOR333CYOR333C 417 nt2.46□□□□□ -2.02
RRP8P38961 NOT5YPR072W 1683 nt2.46□□□□□ -2.02
RRP8P38961 TRL1YJL087C 2484 nt2.46□□□□□ -2.02
RRP8P38961 UBP1YDL122W 2430 nt2.46□□□□□ -2.02
RRP8P38961 CSN9YDR179C 489 nt2.45□□□□□ -2.02
RRP8P38961 YDR366CYDR366C 399 nt2.45□□□□□ -2.02
RRP8P38961 YGL069CYGL069C 465 nt2.45□□□□□ -2.02
RRP8P38961 EMP24YGL200C 612 nt2.45□□□□□ -2.02
RRP8P38961 YJL020W-AYJL020W-A 258 nt2.45□□□□□ -2.02
RRP8P38961 YOL098CYOL098C 3114 nt2.45□□□□□ -2.02
RRP8P38961 SAP185YJL098W 3177 nt2.45□□□□□ -2.02
RRP8P38961 TOF1YNL273W 3717 nt2.44□□□□□ -2.02
RRP8P38961 snR65snR65 100 nt2.44□□□□□ -2.02
RRP8P38961 YHR180W-AYHR180W-A 183 nt2.44□□□□□ -2.02
RRP8P38961 YLR154W-AYLR154W-A 186 nt2.44□□□□□ -2.02
RRP8P38961 RPL32YBL092W 393 nt2.44□□□□□ -2.02
RRP8P38961 YPL229WYPL229W 621 nt2.44□□□□□ -2.02
RRP8P38961 MNE1YOR350C 1992 nt2.43□□□□□ -2.02
RRP8P38961 BRE1YDL074C 2103 nt2.43□□□□□ -2.02
RRP8P38961 YGL239CYGL239C 315 nt2.43□□□□□ -2.02
RRP8P38961 YKL083WYKL083W 615 nt2.43□□□□□ -2.02
RRP8P38961 YAL059C-AYAL059C-A 423 nt2.43□□□□□ -2.02
RRP8P38961 YBR224WYBR224W 516 nt2.43□□□□□ -2.02
RRP8P38961 SCH9YHR205W 2475 nt2.43□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 33 ms