Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PDE6BP35913 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
PDE6BP35913 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PDE6BP35913 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.14■■□□□ 1.62
PDE6BP35913 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
PDE6BP35913 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC25.14■■□□□ 1.62
PDE6BP35913 MIR1238-201ENST00000408483 83 ntBASIC25.14■■□□□ 1.62
PDE6BP35913 AC113347.1-201ENST00000413321 391 ntBASIC25.14■■□□□ 1.62
PDE6BP35913 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC25.14■■□□□ 1.62
PDE6BP35913 PNN-205ENST00000556530 601 ntTSL 2 BASIC25.14■■□□□ 1.62
PDE6BP35913 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC25.14■■□□□ 1.62
PDE6BP35913 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC25.14■■□□□ 1.62
PDE6BP35913 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PDE6BP35913 LINC01568-207ENST00000641790 1380 ntBASIC25.14■■□□□ 1.61
PDE6BP35913 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
PDE6BP35913 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.14■■□□□ 1.61
PDE6BP35913 ME2-206ENST00000638410 2289 ntTSL 5 BASIC25.14■■□□□ 1.61
PDE6BP35913 ME2-210ENST00000639255 2262 ntTSL 5 BASIC25.14■■□□□ 1.61
PDE6BP35913 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PDE6BP35913 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC25.13■■□□□ 1.61
PDE6BP35913 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PDE6BP35913 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PDE6BP35913 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PDE6BP35913 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PDE6BP35913 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC25.13■■□□□ 1.61
PDE6BP35913 NME3-204ENST00000563498 920 ntTSL 2 BASIC25.13■■□□□ 1.61
PDE6BP35913 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC25.13■■□□□ 1.61
PDE6BP35913 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC25.13■■□□□ 1.61
PDE6BP35913 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.13■■□□□ 1.61
PDE6BP35913 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PDE6BP35913 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PDE6BP35913 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PDE6BP35913 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PDE6BP35913 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PDE6BP35913 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC25.12■■□□□ 1.61
PDE6BP35913 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PDE6BP35913 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PDE6BP35913 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC25.12■■□□□ 1.61
PDE6BP35913 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PDE6BP35913 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PDE6BP35913 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC25.12■■□□□ 1.61
PDE6BP35913 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC25.12■■□□□ 1.61
PDE6BP35913 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC25.12■■□□□ 1.61
PDE6BP35913 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
PDE6BP35913 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC25.12■■□□□ 1.61
PDE6BP35913 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC25.12■■□□□ 1.61
PDE6BP35913 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
PDE6BP35913 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PDE6BP35913 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PDE6BP35913 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
PDE6BP35913 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC25.12■■□□□ 1.61
PDE6BP35913 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PDE6BP35913 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PDE6BP35913 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC25.11■■□□□ 1.61
PDE6BP35913 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC25.11■■□□□ 1.61
PDE6BP35913 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PDE6BP35913 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
PDE6BP35913 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
PDE6BP35913 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PDE6BP35913 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PDE6BP35913 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PDE6BP35913 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
PDE6BP35913 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PDE6BP35913 RNF146-204ENST00000476956 884 ntTSL 2 BASIC25.1■■□□□ 1.61
PDE6BP35913 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC25.1■■□□□ 1.61
PDE6BP35913 DUT-205ENST00000558813 769 ntTSL 2 BASIC25.1■■□□□ 1.61
PDE6BP35913 NAPSB-206ENST00000562112 1266 ntBASIC25.1■■□□□ 1.61
PDE6BP35913 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PDE6BP35913 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PDE6BP35913 KRT18P22-201ENST00000402024 1347 ntBASIC25.1■■□□□ 1.61
PDE6BP35913 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC25.09■■□□□ 1.61
PDE6BP35913 AC011484.1-201ENST00000377652 1995 ntBASIC25.09■■□□□ 1.61
PDE6BP35913 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
PDE6BP35913 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
PDE6BP35913 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC25.09■■□□□ 1.61
PDE6BP35913 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC25.09■■□□□ 1.61
PDE6BP35913 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC25.09■■□□□ 1.61
PDE6BP35913 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
PDE6BP35913 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PDE6BP35913 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PDE6BP35913 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PDE6BP35913 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PDE6BP35913 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PDE6BP35913 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
PDE6BP35913 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PDE6BP35913 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PDE6BP35913 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
PDE6BP35913 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC25.08■■□□□ 1.61
PDE6BP35913 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PDE6BP35913 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC25.08■■□□□ 1.61
PDE6BP35913 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC25.08■■□□□ 1.61
PDE6BP35913 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PDE6BP35913 KRT18P57-201ENST00000443599 1254 ntBASIC25.08■■□□□ 1.61
PDE6BP35913 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC25.08■■□□□ 1.61
PDE6BP35913 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PDE6BP35913 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
PDE6BP35913 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.07■■□□□ 1.6
PDE6BP35913 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PDE6BP35913 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PDE6BP35913 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms