Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 AC138907.5-202ENST00000569484 235 ntBASIC19.72■□□□□ 0.75
SOX11P35716 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.72■□□□□ 0.75
SOX11P35716 MYCNOS-205ENST00000641950 531 ntBASIC19.72■□□□□ 0.75
SOX11P35716 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SOX11P35716 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
SOX11P35716 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.71■□□□□ 0.75
SOX11P35716 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX11P35716 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.71■□□□□ 0.75
SOX11P35716 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX11P35716 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.71■□□□□ 0.75
SOX11P35716 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.71■□□□□ 0.75
SOX11P35716 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX11P35716 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SOX11P35716 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX11P35716 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SOX11P35716 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.71■□□□□ 0.75
SOX11P35716 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.71■□□□□ 0.75
SOX11P35716 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
SOX11P35716 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX11P35716 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX11P35716 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.71■□□□□ 0.75
SOX11P35716 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX11P35716 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SOX11P35716 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SOX11P35716 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SOX11P35716 DUX4L16-201ENST00000555130 1264 ntBASIC19.71■□□□□ 0.75
SOX11P35716 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SOX11P35716 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SOX11P35716 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX11P35716 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX11P35716 AC121338.2-201ENST00000622535 1744 ntBASIC19.71■□□□□ 0.75
SOX11P35716 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.7■□□□□ 0.74
SOX11P35716 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOX11P35716 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SOX11P35716 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.7■□□□□ 0.74
SOX11P35716 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOX11P35716 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOX11P35716 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOX11P35716 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOX11P35716 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOX11P35716 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOX11P35716 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOX11P35716 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.7■□□□□ 0.74
SOX11P35716 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SOX11P35716 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.7■□□□□ 0.74
SOX11P35716 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SOX11P35716 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOX11P35716 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOX11P35716 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOX11P35716 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOX11P35716 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SOX11P35716 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SOX11P35716 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SOX11P35716 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SOX11P35716 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.69■□□□□ 0.74
SOX11P35716 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SOX11P35716 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.69■□□□□ 0.74
SOX11P35716 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SOX11P35716 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SOX11P35716 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SOX11P35716 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SOX11P35716 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SOX11P35716 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SOX11P35716 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SOX11P35716 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SOX11P35716 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.69■□□□□ 0.74
SOX11P35716 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.69■□□□□ 0.74
SOX11P35716 AC231657.2-201ENST00000624556 255 ntBASIC19.69■□□□□ 0.74
SOX11P35716 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SOX11P35716 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SOX11P35716 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SOX11P35716 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SOX11P35716 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SOX11P35716 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SOX11P35716 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX11P35716 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.68■□□□□ 0.74
SOX11P35716 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
SOX11P35716 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SOX11P35716 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
SOX11P35716 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.68■□□□□ 0.74
SOX11P35716 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX11P35716 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SOX11P35716 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SOX11P35716 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX11P35716 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SOX11P35716 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.68■□□□□ 0.74
SOX11P35716 KRT18P20-201ENST00000548986 1279 ntBASIC19.68■□□□□ 0.74
SOX11P35716 EEF1DP3-203ENST00000566025 782 ntBASIC19.68■□□□□ 0.74
SOX11P35716 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.68■□□□□ 0.74
SOX11P35716 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.68■□□□□ 0.74
SOX11P35716 AL109923.1-201ENST00000618799 583 ntBASIC19.68■□□□□ 0.74
SOX11P35716 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX11P35716 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX11P35716 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX11P35716 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX11P35716 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SOX11P35716 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.67■□□□□ 0.74
SOX11P35716 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SOX11P35716 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SOX11P35716 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms