Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCK1P35558 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.29■■□□□ 1
PCK1P35558 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
PCK1P35558 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.29■■□□□ 1
PCK1P35558 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCK1P35558 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
PCK1P35558 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.28■■□□□ 1
PCK1P35558 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCK1P35558 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCK1P35558 AL162377.1-201ENST00000618844 1793 ntBASIC21.28■■□□□ 1
PCK1P35558 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
PCK1P35558 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCK1P35558 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCK1P35558 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCK1P35558 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
PCK1P35558 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCK1P35558 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCK1P35558 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PCK1P35558 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.28■■□□□ 1
PCK1P35558 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.28■■□□□ 1
PCK1P35558 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.28■■□□□ 1
PCK1P35558 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PCK1P35558 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.28■■□□□ 1
PCK1P35558 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
PCK1P35558 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCK1P35558 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PCK1P35558 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
PCK1P35558 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.28■■□□□ 1
PCK1P35558 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCK1P35558 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCK1P35558 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCK1P35558 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PCK1P35558 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.27■■□□□ 1
PCK1P35558 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
PCK1P35558 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PCK1P35558 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PCK1P35558 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCK1P35558 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCK1P35558 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PCK1P35558 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCK1P35558 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PCK1P35558 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PCK1P35558 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
PCK1P35558 BID-214ENST00000617586 542 ntTSL 5 BASIC21.27■■□□□ 1
PCK1P35558 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCK1P35558 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PCK1P35558 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.27■■□□□ 1
PCK1P35558 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
PCK1P35558 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCK1P35558 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCK1P35558 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCK1P35558 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.27■□□□□ 0.99
PCK1P35558 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCK1P35558 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCK1P35558 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCK1P35558 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCK1P35558 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.26■□□□□ 0.99
PCK1P35558 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCK1P35558 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.26■□□□□ 0.99
PCK1P35558 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.26■□□□□ 0.99
PCK1P35558 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.26■□□□□ 0.99
PCK1P35558 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.26■□□□□ 0.99
PCK1P35558 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.26■□□□□ 0.99
PCK1P35558 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.26■□□□□ 0.99
PCK1P35558 AC022517.1-201ENST00000592429 346 ntBASIC21.26■□□□□ 0.99
PCK1P35558 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PCK1P35558 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCK1P35558 AC016405.3-201ENST00000607710 860 ntBASIC21.26■□□□□ 0.99
PCK1P35558 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.26■□□□□ 0.99
PCK1P35558 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.26■□□□□ 0.99
PCK1P35558 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCK1P35558 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.26■□□□□ 0.99
PCK1P35558 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.26■□□□□ 0.99
PCK1P35558 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCK1P35558 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PCK1P35558 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCK1P35558 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.25■□□□□ 0.99
PCK1P35558 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PCK1P35558 AC007952.6-201ENST00000573168 2673 ntBASIC21.25■□□□□ 0.99
PCK1P35558 AC003957.1-201ENST00000625108 2673 ntBASIC21.25■□□□□ 0.99
PCK1P35558 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCK1P35558 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.25■□□□□ 0.99
PCK1P35558 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCK1P35558 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCK1P35558 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCK1P35558 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCK1P35558 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.25■□□□□ 0.99
PCK1P35558 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCK1P35558 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.25■□□□□ 0.99
PCK1P35558 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PCK1P35558 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCK1P35558 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.24■□□□□ 0.99
PCK1P35558 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCK1P35558 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCK1P35558 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.24■□□□□ 0.99
PCK1P35558 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PCK1P35558 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.24■□□□□ 0.99
PCK1P35558 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
PCK1P35558 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCK1P35558 AC068338.2-201ENST00000563278 1430 ntBASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms