Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.95■□□□□ 0.78
NELFEP18615 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NELFEP18615 BX276092.2-201ENST00000417668 665 ntBASIC19.95■□□□□ 0.78
NELFEP18615 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.95■□□□□ 0.78
NELFEP18615 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.95■□□□□ 0.78
NELFEP18615 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.95■□□□□ 0.78
NELFEP18615 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NELFEP18615 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NELFEP18615 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NELFEP18615 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NELFEP18615 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NELFEP18615 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NELFEP18615 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NELFEP18615 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
NELFEP18615 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.94■□□□□ 0.78
NELFEP18615 AFG3L1P-217ENST00000557444 2447 ntBASIC19.94■□□□□ 0.78
NELFEP18615 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NELFEP18615 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NELFEP18615 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NELFEP18615 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NELFEP18615 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NELFEP18615 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NELFEP18615 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NELFEP18615 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NELFEP18615 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NELFEP18615 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
NELFEP18615 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
NELFEP18615 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
NELFEP18615 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NELFEP18615 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NELFEP18615 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NELFEP18615 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NELFEP18615 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NELFEP18615 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NELFEP18615 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.93■□□□□ 0.78
NELFEP18615 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NELFEP18615 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.93■□□□□ 0.78
NELFEP18615 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NELFEP18615 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.93■□□□□ 0.78
NELFEP18615 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.93■□□□□ 0.78
NELFEP18615 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.93■□□□□ 0.78
NELFEP18615 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.93■□□□□ 0.78
NELFEP18615 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NELFEP18615 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.93■□□□□ 0.78
NELFEP18615 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NELFEP18615 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NELFEP18615 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.93■□□□□ 0.78
NELFEP18615 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NELFEP18615 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.93■□□□□ 0.78
NELFEP18615 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NELFEP18615 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NELFEP18615 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
NELFEP18615 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NELFEP18615 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.92■□□□□ 0.78
NELFEP18615 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NELFEP18615 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NELFEP18615 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.92■□□□□ 0.78
NELFEP18615 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.92■□□□□ 0.78
NELFEP18615 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.92■□□□□ 0.78
NELFEP18615 FAM21FP-204ENST00000608637 956 ntBASIC19.92■□□□□ 0.78
NELFEP18615 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NELFEP18615 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NELFEP18615 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NELFEP18615 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
NELFEP18615 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.91■□□□□ 0.78
NELFEP18615 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NELFEP18615 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
NELFEP18615 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NELFEP18615 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
NELFEP18615 AC087289.5-201ENST00000586076 3175 ntBASIC19.91■□□□□ 0.78
NELFEP18615 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.91■□□□□ 0.78
NELFEP18615 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.91■□□□□ 0.78
NELFEP18615 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NELFEP18615 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.91■□□□□ 0.78
NELFEP18615 CDV3P1-201ENST00000471403 739 ntBASIC19.91■□□□□ 0.78
NELFEP18615 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NELFEP18615 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.91■□□□□ 0.78
NELFEP18615 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NELFEP18615 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NELFEP18615 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NELFEP18615 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.91■□□□□ 0.78
NELFEP18615 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
NELFEP18615 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NELFEP18615 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NELFEP18615 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NELFEP18615 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NELFEP18615 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NELFEP18615 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NELFEP18615 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NELFEP18615 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
NELFEP18615 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NELFEP18615 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NELFEP18615 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NELFEP18615 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NELFEP18615 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.9■□□□□ 0.78
NELFEP18615 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.9■□□□□ 0.78
NELFEP18615 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NELFEP18615 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NELFEP18615 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NELFEP18615 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms