Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SP9P0CG40 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SP9P0CG40 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
SP9P0CG40 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.17■□□□□ 0.82
SP9P0CG40 NIFKP9-201ENST00000419265 221 ntBASIC20.17■□□□□ 0.82
SP9P0CG40 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SP9P0CG40 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SP9P0CG40 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SP9P0CG40 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SP9P0CG40 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SP9P0CG40 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SP9P0CG40 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SP9P0CG40 CRYGFP-201ENST00000418459 633 ntBASIC20.16■□□□□ 0.82
SP9P0CG40 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SP9P0CG40 ECEL1P2-202ENST00000465689 757 ntBASIC20.16■□□□□ 0.82
SP9P0CG40 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
SP9P0CG40 AC063952.2-201ENST00000498792 1227 ntBASIC20.16■□□□□ 0.82
SP9P0CG40 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.16■□□□□ 0.82
SP9P0CG40 C2orf69P3-201ENST00000565542 1120 ntBASIC20.16■□□□□ 0.82
SP9P0CG40 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.16■□□□□ 0.82
SP9P0CG40 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
SP9P0CG40 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.16■□□□□ 0.82
SP9P0CG40 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.16■□□□□ 0.82
SP9P0CG40 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.16■□□□□ 0.82
SP9P0CG40 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.15■□□□□ 0.82
SP9P0CG40 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.15■□□□□ 0.82
SP9P0CG40 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
SP9P0CG40 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SP9P0CG40 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SP9P0CG40 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
SP9P0CG40 BX664615.1-201ENST00000443558 458 ntBASIC20.15■□□□□ 0.82
SP9P0CG40 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.15■□□□□ 0.82
SP9P0CG40 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
SP9P0CG40 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SP9P0CG40 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.15■□□□□ 0.82
SP9P0CG40 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SP9P0CG40 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
SP9P0CG40 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SP9P0CG40 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SP9P0CG40 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SP9P0CG40 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.14■□□□□ 0.81
SP9P0CG40 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SP9P0CG40 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.14■□□□□ 0.81
SP9P0CG40 KRT18P48-201ENST00000434763 852 ntBASIC20.14■□□□□ 0.81
SP9P0CG40 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.14■□□□□ 0.81
SP9P0CG40 EGLN1P1-201ENST00000531623 762 ntBASIC20.14■□□□□ 0.81
SP9P0CG40 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.14■□□□□ 0.81
SP9P0CG40 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SP9P0CG40 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.14■□□□□ 0.81
SP9P0CG40 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SP9P0CG40 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SP9P0CG40 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SP9P0CG40 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.13■□□□□ 0.81
SP9P0CG40 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SP9P0CG40 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.13■□□□□ 0.81
SP9P0CG40 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SP9P0CG40 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.13■□□□□ 0.81
SP9P0CG40 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SP9P0CG40 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SP9P0CG40 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SP9P0CG40 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SP9P0CG40 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.13■□□□□ 0.81
SP9P0CG40 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SP9P0CG40 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.13■□□□□ 0.81
SP9P0CG40 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SP9P0CG40 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SP9P0CG40 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.13■□□□□ 0.81
SP9P0CG40 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.13■□□□□ 0.81
SP9P0CG40 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SP9P0CG40 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SP9P0CG40 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.12■□□□□ 0.81
SP9P0CG40 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SP9P0CG40 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
SP9P0CG40 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SP9P0CG40 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SP9P0CG40 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SP9P0CG40 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SP9P0CG40 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SP9P0CG40 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SP9P0CG40 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.12■□□□□ 0.81
SP9P0CG40 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SP9P0CG40 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SP9P0CG40 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SP9P0CG40 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SP9P0CG40 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SP9P0CG40 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SP9P0CG40 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SP9P0CG40 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SP9P0CG40 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SP9P0CG40 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.11■□□□□ 0.81
SP9P0CG40 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.11■□□□□ 0.81
SP9P0CG40 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
SP9P0CG40 TSPY14P-201ENST00000303979 915 ntBASIC20.11■□□□□ 0.81
SP9P0CG40 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SP9P0CG40 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SP9P0CG40 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SP9P0CG40 AC026396.1-201ENST00000419388 421 ntBASIC20.11■□□□□ 0.81
SP9P0CG40 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SP9P0CG40 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.11■□□□□ 0.81
SP9P0CG40 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms