Protein–RNA interactions for Protein: P05090

APOD, Apolipoprotein D, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APODP05090 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.6■□□□□ 0.89
APODP05090 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.6■□□□□ 0.89
APODP05090 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
APODP05090 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.59■□□□□ 0.89
APODP05090 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APODP05090 KRT17P2-201ENST00000300992 1314 ntBASIC20.59■□□□□ 0.89
APODP05090 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
APODP05090 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
APODP05090 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APODP05090 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.59■□□□□ 0.89
APODP05090 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
APODP05090 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
APODP05090 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
APODP05090 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
APODP05090 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.59■□□□□ 0.89
APODP05090 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.59■□□□□ 0.89
APODP05090 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.59■□□□□ 0.89
APODP05090 AL049637.2-201ENST00000641778 930 ntBASIC20.59■□□□□ 0.89
APODP05090 FBXW4P1-201ENST00000426721 2239 ntBASIC20.59■□□□□ 0.89
APODP05090 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
APODP05090 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
APODP05090 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
APODP05090 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.58■□□□□ 0.89
APODP05090 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
APODP05090 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
APODP05090 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
APODP05090 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
APODP05090 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
APODP05090 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
APODP05090 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
APODP05090 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
APODP05090 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
APODP05090 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
APODP05090 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
APODP05090 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
APODP05090 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.57■□□□□ 0.88
APODP05090 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
APODP05090 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
APODP05090 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
APODP05090 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.57■□□□□ 0.88
APODP05090 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APODP05090 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APODP05090 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APODP05090 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
APODP05090 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
APODP05090 TSPY7P-201ENST00000431358 1114 ntBASIC20.57■□□□□ 0.88
APODP05090 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
APODP05090 RARRES2P10-201ENST00000564312 460 ntBASIC20.57■□□□□ 0.88
APODP05090 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.57■□□□□ 0.88
APODP05090 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.57■□□□□ 0.88
APODP05090 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.57■□□□□ 0.88
APODP05090 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.57■□□□□ 0.88
APODP05090 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
APODP05090 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
APODP05090 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APODP05090 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.57■□□□□ 0.88
APODP05090 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APODP05090 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
APODP05090 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APODP05090 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APODP05090 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
APODP05090 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
APODP05090 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
APODP05090 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APODP05090 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
APODP05090 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
APODP05090 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
APODP05090 AC121338.2-201ENST00000622535 1744 ntBASIC20.56■□□□□ 0.88
APODP05090 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.56■□□□□ 0.88
APODP05090 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.56■□□□□ 0.88
APODP05090 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APODP05090 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.56■□□□□ 0.88
APODP05090 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
APODP05090 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
APODP05090 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APODP05090 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.56■□□□□ 0.88
APODP05090 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.56■□□□□ 0.88
APODP05090 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.56■□□□□ 0.88
APODP05090 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.56■□□□□ 0.88
APODP05090 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.56■□□□□ 0.88
APODP05090 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
APODP05090 AL121829.2-201ENST00000620908 328 ntBASIC20.56■□□□□ 0.88
APODP05090 REXO1L12P-201ENST00000622156 912 ntBASIC20.56■□□□□ 0.88
APODP05090 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APODP05090 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
APODP05090 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.56■□□□□ 0.88
APODP05090 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
APODP05090 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
APODP05090 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
APODP05090 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
APODP05090 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
APODP05090 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.55■□□□□ 0.88
APODP05090 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.55■□□□□ 0.88
APODP05090 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.55■□□□□ 0.88
APODP05090 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.55■□□□□ 0.88
APODP05090 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.55■□□□□ 0.88
APODP05090 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
APODP05090 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
APODP05090 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
APODP05090 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms