Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.71■■□□□ 1.07
TUBB4AP04350 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.71■■□□□ 1.07
TUBB4AP04350 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TUBB4AP04350 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TUBB4AP04350 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TUBB4AP04350 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.71■■□□□ 1.07
TUBB4AP04350 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.71■■□□□ 1.07
TUBB4AP04350 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TUBB4AP04350 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TUBB4AP04350 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
TUBB4AP04350 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TUBB4AP04350 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TUBB4AP04350 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TUBB4AP04350 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TUBB4AP04350 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TUBB4AP04350 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TUBB4AP04350 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TUBB4AP04350 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TUBB4AP04350 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TUBB4AP04350 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TUBB4AP04350 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TUBB4AP04350 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TUBB4AP04350 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
TUBB4AP04350 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.7■■□□□ 1.06
TUBB4AP04350 NEFHP1-201ENST00000412845 2629 ntBASIC21.7■■□□□ 1.06
TUBB4AP04350 SYT6-210ENST00000641643 1587 ntBASIC21.7■■□□□ 1.06
TUBB4AP04350 AC005082.1-201ENST00000413042 2259 ntBASIC21.69■■□□□ 1.06
TUBB4AP04350 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.69■■□□□ 1.06
TUBB4AP04350 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TUBB4AP04350 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.69■■□□□ 1.06
TUBB4AP04350 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TUBB4AP04350 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TUBB4AP04350 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.69■■□□□ 1.06
TUBB4AP04350 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TUBB4AP04350 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TUBB4AP04350 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TUBB4AP04350 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.69■■□□□ 1.06
TUBB4AP04350 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TUBB4AP04350 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
TUBB4AP04350 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.69■■□□□ 1.06
TUBB4AP04350 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TUBB4AP04350 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TUBB4AP04350 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TUBB4AP04350 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
TUBB4AP04350 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.68■■□□□ 1.06
TUBB4AP04350 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TUBB4AP04350 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TUBB4AP04350 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TUBB4AP04350 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.68■■□□□ 1.06
TUBB4AP04350 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.68■■□□□ 1.06
TUBB4AP04350 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.68■■□□□ 1.06
TUBB4AP04350 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
TUBB4AP04350 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.68■■□□□ 1.06
TUBB4AP04350 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TUBB4AP04350 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TUBB4AP04350 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TUBB4AP04350 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.68■■□□□ 1.06
TUBB4AP04350 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TUBB4AP04350 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TUBB4AP04350 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBB4AP04350 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.67■■□□□ 1.06
TUBB4AP04350 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TUBB4AP04350 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBB4AP04350 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.67■■□□□ 1.06
TUBB4AP04350 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TUBB4AP04350 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBB4AP04350 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.67■■□□□ 1.06
TUBB4AP04350 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.67■■□□□ 1.06
TUBB4AP04350 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.67■■□□□ 1.06
TUBB4AP04350 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.67■■□□□ 1.06
TUBB4AP04350 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.67■■□□□ 1.06
TUBB4AP04350 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBB4AP04350 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TUBB4AP04350 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBB4AP04350 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.67■■□□□ 1.06
TUBB4AP04350 AL138724.1-201ENST00000606771 1088 ntBASIC21.67■■□□□ 1.06
TUBB4AP04350 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TUBB4AP04350 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TUBB4AP04350 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.67■■□□□ 1.06
TUBB4AP04350 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBB4AP04350 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBB4AP04350 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TUBB4AP04350 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.66■■□□□ 1.06
TUBB4AP04350 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TUBB4AP04350 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TUBB4AP04350 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TUBB4AP04350 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.66■■□□□ 1.06
TUBB4AP04350 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TUBB4AP04350 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.66■■□□□ 1.06
TUBB4AP04350 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.66■■□□□ 1.06
TUBB4AP04350 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.66■■□□□ 1.06
TUBB4AP04350 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.66■■□□□ 1.06
TUBB4AP04350 GUSBP5-201ENST00000418136 578 ntBASIC21.66■■□□□ 1.06
TUBB4AP04350 AC239859.2-201ENST00000444165 318 ntBASIC21.66■■□□□ 1.06
TUBB4AP04350 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.66■■□□□ 1.06
TUBB4AP04350 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.66■■□□□ 1.06
TUBB4AP04350 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TUBB4AP04350 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TUBB4AP04350 BX119927.1-201ENST00000636596 1552 ntBASIC21.65■■□□□ 1.06
TUBB4AP04350 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms